Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC9.44□□□□□ -0.9
TgfaP48030 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC9.44□□□□□ -0.9
TgfaP48030 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
TgfaP48030 Gm9619-201ENSMUST00000211587 762 ntBASIC9.44□□□□□ -0.9
TgfaP48030 AC154585.1-201ENSMUST00000218917 997 ntBASIC9.44□□□□□ -0.9
TgfaP48030 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
TgfaP48030 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
TgfaP48030 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
TgfaP48030 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC9.44□□□□□ -0.9
TgfaP48030 Gm5766-201ENSMUST00000160520 1977 ntBASIC9.44□□□□□ -0.9
TgfaP48030 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
TgfaP48030 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
TgfaP48030 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
TgfaP48030 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
TgfaP48030 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
TgfaP48030 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
TgfaP48030 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
TgfaP48030 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC9.43□□□□□ -0.9
TgfaP48030 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.43□□□□□ -0.9
TgfaP48030 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
TgfaP48030 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Gm14997-201ENSMUST00000119232 636 ntBASIC9.43□□□□□ -0.9
TgfaP48030 Gm14699-201ENSMUST00000122340 228 ntBASIC9.43□□□□□ -0.9
TgfaP48030 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC9.43□□□□□ -0.9
TgfaP48030 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC9.43□□□□□ -0.9
TgfaP48030 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC9.43□□□□□ -0.9
TgfaP48030 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
TgfaP48030 Gm43106-201ENSMUST00000199485 637 ntBASIC9.43□□□□□ -0.9
TgfaP48030 Ighv1-86-201ENSMUST00000200562 353 ntBASIC9.43□□□□□ -0.9
TgfaP48030 Gm44908-201ENSMUST00000208610 266 ntBASIC9.43□□□□□ -0.9
TgfaP48030 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Gm8615-201ENSMUST00000025307 771 ntBASIC9.43□□□□□ -0.9
TgfaP48030 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
TgfaP48030 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
TgfaP48030 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
TgfaP48030 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Gm43102-201ENSMUST00000201004 2324 ntBASIC9.43□□□□□ -0.9
TgfaP48030 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TgfaP48030 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC9.43□□□□□ -0.9
TgfaP48030 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
TgfaP48030 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
TgfaP48030 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
TgfaP48030 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC9.42□□□□□ -0.9
TgfaP48030 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
TgfaP48030 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
TgfaP48030 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
TgfaP48030 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
TgfaP48030 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.42□□□□□ -0.9
TgfaP48030 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
TgfaP48030 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
TgfaP48030 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
TgfaP48030 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 123 ms