Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Nkx1-2P42580 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx1-2P42580 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx1-2P42580 Carmil2-203ENSMUST00000213019 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx1-2P42580 Rad51d-201ENSMUST00000018985 3426 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx1-2P42580 AC122291.1-201ENSMUST00000228937 5748 ntBASIC13.21□□□□□ -0.3
Nkx1-2P42580 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx1-2P42580 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx1-2P42580 Btrc-206ENSMUST00000224102 3037 ntBASIC13.21□□□□□ -0.3
Nkx1-2P42580 Smok3a-202ENSMUST00000171498 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx1-2P42580 Alppl2-201ENSMUST00000027455 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 5830462I19Rik-201ENSMUST00000168137 3383 ntBASIC13.2□□□□□ -0.3
Nkx1-2P42580 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC13.2□□□□□ -0.3
Nkx1-2P42580 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Gm10804-201ENSMUST00000099693 2244 ntTSL 2 BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Gm12337-201ENSMUST00000119634 400 ntBASIC13.2□□□□□ -0.3
Nkx1-2P42580 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.2□□□□□ -0.3
Nkx1-2P42580 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Gm9211-201ENSMUST00000182882 975 ntBASIC13.2□□□□□ -0.3
Nkx1-2P42580 Gm27910-201ENSMUST00000185004 107 ntBASIC13.2□□□□□ -0.3
Nkx1-2P42580 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Gm9369-201ENSMUST00000196009 733 ntBASIC13.2□□□□□ -0.3
Nkx1-2P42580 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Gm9661-201ENSMUST00000221611 1122 ntBASIC13.2□□□□□ -0.3
Nkx1-2P42580 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.2□□□□□ -0.3
Nkx1-2P42580 AC129975.1-201ENSMUST00000224816 592 ntBASIC13.2□□□□□ -0.3
Nkx1-2P42580 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Nkx1-2P42580 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Parp3-201ENSMUST00000067218 2962 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Gm43112-201ENSMUST00000196665 3122 ntBASIC13.2□□□□□ -0.3
Nkx1-2P42580 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Gpm6b-205ENSMUST00000112227 3294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Atg13-202ENSMUST00000076803 3551 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Tex21-202ENSMUST00000218426 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx1-2P42580 Gm19027-201ENSMUST00000187291 1355 ntBASIC13.2□□□□□ -0.3
Nkx1-2P42580 AC158636.1-201ENSMUST00000220118 1393 ntBASIC13.2□□□□□ -0.3
Nkx1-2P42580 Ptpn7-201ENSMUST00000049449 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx1-2P42580 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx1-2P42580 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx1-2P42580 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.19□□□□□ -0.3
Nkx1-2P42580 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx1-2P42580 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx1-2P42580 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx1-2P42580 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC13.19□□□□□ -0.3
Nkx1-2P42580 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx1-2P42580 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx1-2P42580 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx1-2P42580 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.19□□□□□ -0.3
Nkx1-2P42580 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.19□□□□□ -0.3
Nkx1-2P42580 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx1-2P42580 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx1-2P42580 Gm16165-201ENSMUST00000160140 795 ntBASIC13.19□□□□□ -0.3
Nkx1-2P42580 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nkx1-2P42580 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC13.19□□□□□ -0.3
Nkx1-2P42580 Gm37852-201ENSMUST00000193027 350 ntBASIC13.19□□□□□ -0.3
Nkx1-2P42580 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.19□□□□□ -0.3
Nkx1-2P42580 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.19□□□□□ -0.3
Nkx1-2P42580 AC122346.3-201ENSMUST00000223983 306 ntBASIC13.19□□□□□ -0.3
Nkx1-2P42580 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.19□□□□□ -0.3
Nkx1-2P42580 CT025679.1-201ENSMUST00000227106 449 ntBASIC13.19□□□□□ -0.3
Nkx1-2P42580 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Nkx1-2P42580 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx1-2P42580 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms