Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl12P40224 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cxcl12P40224 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl12P40224 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl12P40224 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cxcl12P40224 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl12P40224 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.1□□□□□ -0.63
Cxcl12P40224 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cxcl12P40224 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cxcl12P40224 Gm24470-201ENSMUST00000104486 132 ntBASIC11.1□□□□□ -0.63
Cxcl12P40224 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cxcl12P40224 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC11.1□□□□□ -0.63
Cxcl12P40224 Fam220-ps-201ENSMUST00000116535 783 ntBASIC11.1□□□□□ -0.63
Cxcl12P40224 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cxcl12P40224 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl12P40224 1700112J05Rik-201ENSMUST00000129353 793 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl12P40224 Gm15664-201ENSMUST00000160167 184 ntBASIC11.1□□□□□ -0.63
Cxcl12P40224 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC11.1□□□□□ -0.63
Cxcl12P40224 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC11.1□□□□□ -0.63
Cxcl12P40224 Gm6665-201ENSMUST00000165131 258 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cxcl12P40224 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC11.1□□□□□ -0.63
Cxcl12P40224 Gm24466-201ENSMUST00000179978 109 ntBASIC11.1□□□□□ -0.63
Cxcl12P40224 Gm36980-201ENSMUST00000195643 622 ntBASIC11.1□□□□□ -0.63
Cxcl12P40224 Gm44460-201ENSMUST00000196179 129 ntBASIC11.1□□□□□ -0.63
Cxcl12P40224 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC11.1□□□□□ -0.63
Cxcl12P40224 Gm44716-201ENSMUST00000209007 710 ntBASIC11.1□□□□□ -0.63
Cxcl12P40224 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.1□□□□□ -0.63
Cxcl12P40224 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl12P40224 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl12P40224 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl12P40224 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cxcl12P40224 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.1□□□□□ -0.63
Cxcl12P40224 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl12P40224 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl12P40224 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cxcl12P40224 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl12P40224 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl12P40224 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl12P40224 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl12P40224 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl12P40224 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Cxcl12P40224 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cxcl12P40224 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Cxcl12P40224 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.09□□□□□ -0.63
Cxcl12P40224 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cxcl12P40224 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Gm4925-202ENSMUST00000168843 1561 ntBASIC11.09□□□□□ -0.63
Cxcl12P40224 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cxcl12P40224 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Serpina1b-201ENSMUST00000095450 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Cxcl12P40224 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC11.09□□□□□ -0.63
Cxcl12P40224 Oosp2-201ENSMUST00000121793 677 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Gm11715-201ENSMUST00000129501 695 ntTSL 2 BASIC11.09□□□□□ -0.63
Cxcl12P40224 4933439K11Rik-202ENSMUST00000140307 941 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC11.09□□□□□ -0.63
Cxcl12P40224 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Gm23555-201ENSMUST00000157815 135 ntBASIC11.09□□□□□ -0.63
Cxcl12P40224 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC11.09□□□□□ -0.63
Cxcl12P40224 Rps28-205ENSMUST00000173844 382 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC11.09□□□□□ -0.63
Cxcl12P40224 Gm38301-201ENSMUST00000195573 543 ntBASIC11.09□□□□□ -0.63
Cxcl12P40224 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC11.09□□□□□ -0.63
Cxcl12P40224 Gm42710-201ENSMUST00000200608 985 ntBASIC11.09□□□□□ -0.63
Cxcl12P40224 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC11.09□□□□□ -0.63
Cxcl12P40224 Olfr139-203ENSMUST00000206280 1059 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Cxcl12P40224 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC11.09□□□□□ -0.63
Cxcl12P40224 Gm18749-201ENSMUST00000222410 692 ntBASIC11.09□□□□□ -0.63
Cxcl12P40224 Gzmf-201ENSMUST00000022757 919 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Taar1-201ENSMUST00000051532 1114 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cxcl12P40224 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl12P40224 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms