Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Upk2P38575 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Upk2P38575 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Upk2P38575 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Upk2P38575 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Upk2P38575 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Upk2P38575 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Upk2P38575 AC153524.2-202ENSMUST00000220401 1794 ntBASIC9.44□□□□□ -0.9
Upk2P38575 Gm42521-201ENSMUST00000199190 2040 ntBASIC9.44□□□□□ -0.9
Upk2P38575 Gm37859-201ENSMUST00000195529 2173 ntBASIC9.44□□□□□ -0.9
Upk2P38575 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Upk2P38575 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC9.44□□□□□ -0.9
Upk2P38575 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Upk2P38575 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Upk2P38575 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
Upk2P38575 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Upk2P38575 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Upk2P38575 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Upk2P38575 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Upk2P38575 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Upk2P38575 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Upk2P38575 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Upk2P38575 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Upk2P38575 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Upk2P38575 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Upk2P38575 Gm45011-201ENSMUST00000207620 2297 ntBASIC9.43□□□□□ -0.9
Upk2P38575 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Upk2P38575 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Upk2P38575 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Upk2P38575 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Upk2P38575 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Upk2P38575 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC9.43□□□□□ -0.9
Upk2P38575 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Upk2P38575 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Upk2P38575 Gm14263-201ENSMUST00000117955 746 ntBASIC9.43□□□□□ -0.9
Upk2P38575 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Upk2P38575 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC9.43□□□□□ -0.9
Upk2P38575 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Upk2P38575 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Upk2P38575 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Upk2P38575 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC9.43□□□□□ -0.9
Upk2P38575 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Upk2P38575 Gm9081-201ENSMUST00000182346 991 ntBASIC9.43□□□□□ -0.9
Upk2P38575 Gm37860-201ENSMUST00000195380 1034 ntBASIC9.43□□□□□ -0.9
Upk2P38575 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC9.43□□□□□ -0.9
Upk2P38575 Gm42710-201ENSMUST00000200608 985 ntBASIC9.43□□□□□ -0.9
Upk2P38575 Gm5881-201ENSMUST00000204737 367 ntBASIC9.43□□□□□ -0.9
Upk2P38575 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC9.43□□□□□ -0.9
Upk2P38575 CT009536.2-201ENSMUST00000225370 665 ntBASIC9.43□□□□□ -0.9
Upk2P38575 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Upk2P38575 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Upk2P38575 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Upk2P38575 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Upk2P38575 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Upk2P38575 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Upk2P38575 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Upk2P38575 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Upk2P38575 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Upk2P38575 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Upk2P38575 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Upk2P38575 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC9.43□□□□□ -0.9
Upk2P38575 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Upk2P38575 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Upk2P38575 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC9.42□□□□□ -0.9
Upk2P38575 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Upk2P38575 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Upk2P38575 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Upk2P38575 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Upk2P38575 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC9.42□□□□□ -0.9
Upk2P38575 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.42□□□□□ -0.9
Upk2P38575 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Upk2P38575 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Upk2P38575 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Upk2P38575 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Upk2P38575 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Upk2P38575 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Upk2P38575 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Upk2P38575 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Upk2P38575 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Upk2P38575 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Upk2P38575 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Upk2P38575 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Upk2P38575 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Upk2P38575 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Upk2P38575 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC9.42□□□□□ -0.9
Upk2P38575 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Upk2P38575 Gm25562-201ENSMUST00000104608 133 ntBASIC9.42□□□□□ -0.9
Upk2P38575 Gm11667-201ENSMUST00000119828 486 ntBASIC9.42□□□□□ -0.9
Upk2P38575 Gm13937-201ENSMUST00000121000 988 ntBASIC9.42□□□□□ -0.9
Upk2P38575 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Upk2P38575 Gm22379-201ENSMUST00000157480 131 ntBASIC9.42□□□□□ -0.9
Upk2P38575 Mir3102-201ENSMUST00000175555 104 ntBASIC9.42□□□□□ -0.9
Upk2P38575 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Upk2P38575 Gm42518-201ENSMUST00000196277 938 ntBASIC9.42□□□□□ -0.9
Upk2P38575 Gm42780-201ENSMUST00000197083 734 ntBASIC9.42□□□□□ -0.9
Upk2P38575 Gm3726-201ENSMUST00000203110 785 ntBASIC9.42□□□□□ -0.9
Upk2P38575 Gm10109-202ENSMUST00000206890 1211 ntBASIC9.42□□□□□ -0.9
Upk2P38575 Gm5178-201ENSMUST00000219380 898 ntBASIC9.42□□□□□ -0.9
Upk2P38575 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Upk2P38575 AC154431.1-201ENSMUST00000224910 880 ntBASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms