Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC9.42□□□□□ -0.9
Cd28P31041 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Mipep-ps-201ENSMUST00000177439 291 ntBASIC9.42□□□□□ -0.9
Cd28P31041 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Cd28P31041 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC9.42□□□□□ -0.9
Cd28P31041 Gm37259-201ENSMUST00000193903 849 ntBASIC9.42□□□□□ -0.9
Cd28P31041 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC9.42□□□□□ -0.9
Cd28P31041 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC9.42□□□□□ -0.9
Cd28P31041 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Gm45310-201ENSMUST00000210436 275 ntBASIC9.42□□□□□ -0.9
Cd28P31041 Gm6082-201ENSMUST00000215204 454 ntBASIC9.42□□□□□ -0.9
Cd28P31041 Gm2517-201ENSMUST00000215651 348 ntBASIC9.42□□□□□ -0.9
Cd28P31041 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC9.42□□□□□ -0.9
Cd28P31041 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Cd28P31041 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Copa-206ENSMUST00000135192 4622 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 AC153498.1-201ENSMUST00000219775 2722 ntBASIC9.42□□□□□ -0.9
Cd28P31041 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Cd28P31041 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
Cd28P31041 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Zbtb26-201ENSMUST00000067043 5267 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Clcn1-201ENSMUST00000031894 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Aasdhppt-201ENSMUST00000051589 2843 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Cd28P31041 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC9.41□□□□□ -0.9
Cd28P31041 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
Cd28P31041 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC9.41□□□□□ -0.9
Cd28P31041 Dram2-202ENSMUST00000067630 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Stx8-201ENSMUST00000021285 4394 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Stard13-201ENSMUST00000062015 5526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC9.41□□□□□ -0.9
Cd28P31041 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Gm37806-201ENSMUST00000194524 6387 ntBASIC9.41□□□□□ -0.9
Cd28P31041 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Gm11661-201ENSMUST00000121761 1327 ntBASIC9.41□□□□□ -0.9
Cd28P31041 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Cd28P31041 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC9.41□□□□□ -0.9
Cd28P31041 Gm15528-201ENSMUST00000117821 864 ntBASIC9.41□□□□□ -0.9
Cd28P31041 Gm15515-201ENSMUST00000117827 822 ntBASIC9.41□□□□□ -0.9
Cd28P31041 Gm14723-201ENSMUST00000118686 215 ntBASIC9.41□□□□□ -0.9
Cd28P31041 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC9.41□□□□□ -0.9
Cd28P31041 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC9.41□□□□□ -0.9
Cd28P31041 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC9.41□□□□□ -0.9
Cd28P31041 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC9.41□□□□□ -0.9
Cd28P31041 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC9.41□□□□□ -0.9
Cd28P31041 Gm25661-201ENSMUST00000157704 296 ntBASIC9.41□□□□□ -0.9
Cd28P31041 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC9.41□□□□□ -0.9
Cd28P31041 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC9.41□□□□□ -0.9
Cd28P31041 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Gm27953-201ENSMUST00000185171 143 ntBASIC9.41□□□□□ -0.9
Cd28P31041 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Cd28P31041 Gm5733-201ENSMUST00000190232 939 ntBASIC9.41□□□□□ -0.9
Cd28P31041 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC9.41□□□□□ -0.9
Cd28P31041 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC9.41□□□□□ -0.9
Cd28P31041 Gm45909-201ENSMUST00000212413 1031 ntBASIC9.41□□□□□ -0.9
Cd28P31041 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Cd28P31041 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Cd28P31041 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Olfr584-201ENSMUST00000098210 964 ntBASIC9.41□□□□□ -0.9
Cd28P31041 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC9.41□□□□□ -0.9
Cd28P31041 R3hdm2-218ENSMUST00000170336 3639 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cd28P31041 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Cd28P31041 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Cd28P31041 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Cd28P31041 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms