Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gcm1-201ENSMUST00000024104 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Gm12059-201ENSMUST00000128996 3105 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC9.84□□□□□ -0.83
Nedd8P29595 Csf2rb2-201ENSMUST00000096356 4612 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC9.84□□□□□ -0.83
Nedd8P29595 Zfp536-206ENSMUST00000176205 4372 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 Gmeb2-201ENSMUST00000049032 4121 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nedd8P29595 AC154352.1-201ENSMUST00000221477 2365 ntBASIC9.83□□□□□ -0.84
Nedd8P29595 Cdkl1-201ENSMUST00000021377 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Atp8b3-201ENSMUST00000020383 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Rorc-201ENSMUST00000029795 2136 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Radil-202ENSMUST00000085758 3714 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
Nedd8P29595 Acta2-201ENSMUST00000039631 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Gm9271-201ENSMUST00000185988 2580 ntBASIC9.83□□□□□ -0.84
Nedd8P29595 Ccdc33-210ENSMUST00000215944 3012 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Nedd8P29595 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC9.83□□□□□ -0.84
Nedd8P29595 Cntrl-206ENSMUST00000113037 5970 ntTSL 5 BASIC9.83□□□□□ -0.84
Nedd8P29595 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC9.83□□□□□ -0.84
Nedd8P29595 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Gys1-201ENSMUST00000003964 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Gm38116-201ENSMUST00000193873 1533 ntBASIC9.83□□□□□ -0.84
Nedd8P29595 Slco5a1-204ENSMUST00000136197 5123 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Gpatch4-201ENSMUST00000029707 1630 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Mfsd2b-204ENSMUST00000137337 2641 ntTSL 2 BASIC9.83□□□□□ -0.84
Nedd8P29595 Zfp446-201ENSMUST00000045810 4615 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Gm35394-201ENSMUST00000196434 3252 ntTSL 5 BASIC9.83□□□□□ -0.84
Nedd8P29595 Gm23270-201ENSMUST00000104055 131 ntBASIC9.83□□□□□ -0.84
Nedd8P29595 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC9.83□□□□□ -0.84
Nedd8P29595 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC9.83□□□□□ -0.84
Nedd8P29595 Gm8111-201ENSMUST00000117659 987 ntBASIC9.83□□□□□ -0.84
Nedd8P29595 Ptgds-201ENSMUST00000015234 901 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC9.83□□□□□ -0.84
Nedd8P29595 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC9.83□□□□□ -0.84
Nedd8P29595 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC9.83□□□□□ -0.84
Nedd8P29595 Gm5714-201ENSMUST00000197343 566 ntBASIC9.83□□□□□ -0.84
Nedd8P29595 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC9.83□□□□□ -0.84
Nedd8P29595 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
Nedd8P29595 Gm30285-201ENSMUST00000214614 422 ntBASIC9.83□□□□□ -0.84
Nedd8P29595 AC164437.3-201ENSMUST00000228323 347 ntBASIC9.83□□□□□ -0.84
Nedd8P29595 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Nedd8P29595 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Gm26815-201ENSMUST00000181200 3366 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Csnk2a1-201ENSMUST00000099224 4206 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Gin1-203ENSMUST00000112844 2046 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Sypl-202ENSMUST00000076698 4999 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Osbpl5-201ENSMUST00000020411 3994 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Sdhaf3-201ENSMUST00000040826 4323 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nedd8P29595 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Nedd8P29595 Gm12381-201ENSMUST00000126314 2186 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nedd8P29595 Gm28138-201ENSMUST00000186250 2167 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nedd8P29595 Gm29270-201ENSMUST00000188071 2167 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nedd8P29595 Gm29392-201ENSMUST00000189429 2167 ntTSL 5 BASIC9.82□□□□□ -0.84
Nedd8P29595 Gm29252-201ENSMUST00000189869 2167 ntTSL 5 BASIC9.82□□□□□ -0.84
Nedd8P29595 Gm29305-201ENSMUST00000191054 2167 ntTSL 5 BASIC9.82□□□□□ -0.84
Nedd8P29595 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nedd8P29595 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nedd8P29595 Pcdh1-201ENSMUST00000057185 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nedd8P29595 Rreb1-207ENSMUST00000128570 8436 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Nedd8P29595 Zbtb34-202ENSMUST00000113158 6602 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Nedd8P29595 Cyp2e1-201ENSMUST00000026552 1833 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nedd8P29595 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nedd8P29595 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nedd8P29595 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nedd8P29595 Gm26704-201ENSMUST00000181362 2901 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nedd8P29595 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nedd8P29595 Fgd1-202ENSMUST00000112685 3240 ntTSL 5 BASIC9.82□□□□□ -0.84
Nedd8P29595 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Nedd8P29595 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC9.82□□□□□ -0.84
Nedd8P29595 Gm15549-201ENSMUST00000121595 622 ntBASIC9.82□□□□□ -0.84
Nedd8P29595 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC9.82□□□□□ -0.84
Nedd8P29595 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nedd8P29595 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Nedd8P29595 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC9.82□□□□□ -0.84
Nedd8P29595 Rprl1-202ENSMUST00000198476 238 ntBASIC9.82□□□□□ -0.84
Nedd8P29595 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC9.82□□□□□ -0.84
Nedd8P29595 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.82□□□□□ -0.84
Nedd8P29595 AC112945.1-201ENSMUST00000226413 514 ntBASIC9.82□□□□□ -0.84
Nedd8P29595 CT025535.1-201ENSMUST00000227172 491 ntBASIC9.82□□□□□ -0.84
Nedd8P29595 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nedd8P29595 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nedd8P29595 Lima1-202ENSMUST00000109024 4109 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nedd8P29595 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.82□□□□□ -0.84
Nedd8P29595 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nedd8P29595 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Nedd8P29595 Zfp462-201ENSMUST00000030131 4823 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Nedd8P29595 Topaz1-201ENSMUST00000178679 5030 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nedd8P29595 Pla1a-201ENSMUST00000002926 1972 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nedd8P29595 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nedd8P29595 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms