Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.51□□□□□ -0.41
Col1a1P11087 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col1a1P11087 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col1a1P11087 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col1a1P11087 Gm44664-201ENSMUST00000206841 1786 ntBASIC12.51□□□□□ -0.41
Col1a1P11087 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.51□□□□□ -0.41
Col1a1P11087 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.51□□□□□ -0.41
Col1a1P11087 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col1a1P11087 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col1a1P11087 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.51□□□□□ -0.41
Col1a1P11087 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col1a1P11087 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col1a1P11087 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col1a1P11087 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col1a1P11087 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col1a1P11087 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col1a1P11087 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col1a1P11087 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col1a1P11087 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.51□□□□□ -0.41
Col1a1P11087 AC130671.3-201ENSMUST00000227393 1897 ntBASIC12.51□□□□□ -0.41
Col1a1P11087 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC12.51□□□□□ -0.41
Col1a1P11087 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col1a1P11087 Gm12420-201ENSMUST00000119869 1048 ntBASIC12.51□□□□□ -0.41
Col1a1P11087 Eif4a-ps4-201ENSMUST00000122226 1218 ntBASIC12.51□□□□□ -0.41
Col1a1P11087 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC12.51□□□□□ -0.41
Col1a1P11087 1700112J05Rik-201ENSMUST00000129353 793 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col1a1P11087 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC12.51□□□□□ -0.41
Col1a1P11087 Gm3687-201ENSMUST00000161710 460 ntBASIC12.51□□□□□ -0.41
Col1a1P11087 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col1a1P11087 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col1a1P11087 Gm7251-201ENSMUST00000182661 1009 ntBASIC12.51□□□□□ -0.41
Col1a1P11087 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC12.51□□□□□ -0.41
Col1a1P11087 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC12.51□□□□□ -0.41
Col1a1P11087 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC12.51□□□□□ -0.41
Col1a1P11087 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC12.51□□□□□ -0.41
Col1a1P11087 Gzmf-201ENSMUST00000022757 919 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col1a1P11087 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col1a1P11087 Olfr1349-201ENSMUST00000051982 1054 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col1a1P11087 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.51□□□□□ -0.41
Col1a1P11087 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col1a1P11087 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col1a1P11087 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col1a1P11087 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col1a1P11087 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col1a1P11087 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.51□□□□□ -0.41
Col1a1P11087 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col1a1P11087 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col1a1P11087 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC12.5□□□□□ -0.41
Col1a1P11087 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col1a1P11087 Gm28624-201ENSMUST00000186430 2131 ntBASIC12.5□□□□□ -0.41
Col1a1P11087 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC12.5□□□□□ -0.41
Col1a1P11087 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col1a1P11087 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col1a1P11087 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC12.5□□□□□ -0.41
Col1a1P11087 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC12.5□□□□□ -0.41
Col1a1P11087 AC158777.1-201ENSMUST00000226216 1724 ntBASIC12.5□□□□□ -0.41
Col1a1P11087 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col1a1P11087 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.5□□□□□ -0.41
Col1a1P11087 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Col1a1P11087 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Col1a1P11087 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.5□□□□□ -0.41
Col1a1P11087 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col1a1P11087 Adh1-201ENSMUST00000004232 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col1a1P11087 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col1a1P11087 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col1a1P11087 Oosp2-201ENSMUST00000121793 677 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col1a1P11087 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC12.5□□□□□ -0.41
Col1a1P11087 Gm3355-201ENSMUST00000160079 487 ntBASIC12.5□□□□□ -0.41
Col1a1P11087 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col1a1P11087 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col1a1P11087 Gm28746-201ENSMUST00000187453 380 ntBASIC12.5□□□□□ -0.41
Col1a1P11087 Gm2316-201ENSMUST00000190613 921 ntBASIC12.5□□□□□ -0.41
Col1a1P11087 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC12.5□□□□□ -0.41
Col1a1P11087 Gm30652-201ENSMUST00000199103 430 ntBASIC12.5□□□□□ -0.41
Col1a1P11087 Gm9273-201ENSMUST00000200606 715 ntBASIC12.5□□□□□ -0.41
Col1a1P11087 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC12.5□□□□□ -0.41
Col1a1P11087 AC124772.3-201ENSMUST00000222535 575 ntBASIC12.5□□□□□ -0.41
Col1a1P11087 AC149294.3-201ENSMUST00000226888 732 ntBASIC12.5□□□□□ -0.41
Col1a1P11087 Cog5-201ENSMUST00000036862 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col1a1P11087 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Col1a1P11087 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col1a1P11087 AC124732.3-201ENSMUST00000221835 1765 ntBASIC12.5□□□□□ -0.41
Col1a1P11087 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Col1a1P11087 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col1a1P11087 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col1a1P11087 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col1a1P11087 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col1a1P11087 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col1a1P11087 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col1a1P11087 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Col1a1P11087 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col1a1P11087 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col1a1P11087 Gm42731-201ENSMUST00000201839 1641 ntBASIC12.49□□□□□ -0.41
Col1a1P11087 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC12.49□□□□□ -0.41
Col1a1P11087 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Col1a1P11087 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col1a1P11087 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col1a1P11087 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.49□□□□□ -0.41
Col1a1P11087 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col1a1P11087 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms