Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
UbbP0CG49 Gm14208-201ENSMUST00000119645 678 ntBASIC9.36□□□□□ -0.91
UbbP0CG49 Gm12749-201ENSMUST00000122138 1159 ntBASIC9.36□□□□□ -0.91
UbbP0CG49 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC9.36□□□□□ -0.91
UbbP0CG49 Gm7666-201ENSMUST00000146631 819 ntBASIC9.36□□□□□ -0.91
UbbP0CG49 Mir1938-201ENSMUST00000158746 100 ntBASIC9.36□□□□□ -0.91
UbbP0CG49 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Mipep-ps-201ENSMUST00000177439 291 ntBASIC9.36□□□□□ -0.91
UbbP0CG49 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
UbbP0CG49 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC9.36□□□□□ -0.91
UbbP0CG49 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC9.36□□□□□ -0.91
UbbP0CG49 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
UbbP0CG49 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC9.36□□□□□ -0.91
UbbP0CG49 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
UbbP0CG49 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 CT025694.1-201ENSMUST00000226188 934 ntBASIC9.36□□□□□ -0.91
UbbP0CG49 Gm5468-202ENSMUST00000227851 682 ntBASIC9.36□□□□□ -0.91
UbbP0CG49 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
UbbP0CG49 Olfr582-201ENSMUST00000098212 960 ntBASIC9.36□□□□□ -0.91
UbbP0CG49 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC9.36□□□□□ -0.91
UbbP0CG49 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC9.36□□□□□ -0.91
UbbP0CG49 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
UbbP0CG49 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
UbbP0CG49 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC9.36□□□□□ -0.91
UbbP0CG49 Gm10804-201ENSMUST00000099693 2244 ntTSL 2 BASIC9.36□□□□□ -0.91
UbbP0CG49 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
UbbP0CG49 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Gm38344-201ENSMUST00000195306 1353 ntBASIC9.36□□□□□ -0.91
UbbP0CG49 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
UbbP0CG49 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
UbbP0CG49 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
UbbP0CG49 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
UbbP0CG49 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC9.35□□□□□ -0.91
UbbP0CG49 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Gm42741-201ENSMUST00000201340 2278 ntBASIC9.35□□□□□ -0.91
UbbP0CG49 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Gm44445-201ENSMUST00000204075 2683 ntBASIC9.35□□□□□ -0.91
UbbP0CG49 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 n-R5s64-201ENSMUST00000102019 119 ntBASIC9.35□□□□□ -0.91
UbbP0CG49 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
UbbP0CG49 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
UbbP0CG49 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC9.35□□□□□ -0.91
UbbP0CG49 Gm12986-201ENSMUST00000119037 967 ntBASIC9.35□□□□□ -0.91
UbbP0CG49 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC9.35□□□□□ -0.91
UbbP0CG49 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC9.35□□□□□ -0.91
UbbP0CG49 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC9.35□□□□□ -0.91
UbbP0CG49 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC9.35□□□□□ -0.91
UbbP0CG49 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC9.35□□□□□ -0.91
UbbP0CG49 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC9.35□□□□□ -0.91
UbbP0CG49 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC9.35□□□□□ -0.91
UbbP0CG49 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC9.35□□□□□ -0.91
UbbP0CG49 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Gm37835-201ENSMUST00000193305 361 ntBASIC9.35□□□□□ -0.91
UbbP0CG49 Ighv5-11-201ENSMUST00000193354 371 ntBASIC9.35□□□□□ -0.91
UbbP0CG49 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC9.35□□□□□ -0.91
UbbP0CG49 Gstp-ps-201ENSMUST00000195526 631 ntBASIC9.35□□□□□ -0.91
UbbP0CG49 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Gm19091-201ENSMUST00000208120 978 ntBASIC9.35□□□□□ -0.91
UbbP0CG49 Gm45310-201ENSMUST00000210436 275 ntBASIC9.35□□□□□ -0.91
UbbP0CG49 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
UbbP0CG49 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC9.35□□□□□ -0.91
UbbP0CG49 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC9.35□□□□□ -0.91
UbbP0CG49 Gm5451-201ENSMUST00000080545 579 ntBASIC9.35□□□□□ -0.91
UbbP0CG49 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
UbbP0CG49 Gm7551-201ENSMUST00000089593 1074 ntBASIC9.35□□□□□ -0.91
UbbP0CG49 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
UbbP0CG49 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
UbbP0CG49 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms