Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm18615-201ENSMUST00000222919 1031 ntBASIC8.85□□□□□ -0.99
Hmgb3O54879 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC8.85□□□□□ -0.99
Hmgb3O54879 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Tacr1-202ENSMUST00000203775 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Sgo2b-201ENSMUST00000179944 3739 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Hmgb3O54879 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Hmgb3O54879 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC8.85□□□□□ -0.99
Hmgb3O54879 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Aasdhppt-201ENSMUST00000051589 2843 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Zmpste24-201ENSMUST00000058754 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC8.84□□□□□ -0.99
Hmgb3O54879 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Hmgb3O54879 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Hmgb3O54879 D2hgdh-202ENSMUST00000112881 3459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Stat6-201ENSMUST00000092074 3775 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Hmgb3O54879 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC8.84□□□□□ -0.99
Hmgb3O54879 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Hmgb3O54879 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Hmgb3O54879 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC8.84□□□□□ -0.99
Hmgb3O54879 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Gm5616-201ENSMUST00000165252 384 ntBASIC8.84□□□□□ -0.99
Hmgb3O54879 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Hmgb3O54879 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Gm8741-201ENSMUST00000174736 384 ntBASIC8.84□□□□□ -0.99
Hmgb3O54879 Gm10807-201ENSMUST00000177134 795 ntBASIC8.84□□□□□ -0.99
Hmgb3O54879 Gm37424-201ENSMUST00000191727 561 ntBASIC8.84□□□□□ -0.99
Hmgb3O54879 Ighv5-7-201ENSMUST00000192302 244 ntBASIC8.84□□□□□ -0.99
Hmgb3O54879 Gm37301-201ENSMUST00000195412 568 ntBASIC8.84□□□□□ -0.99
Hmgb3O54879 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC8.84□□□□□ -0.99
Hmgb3O54879 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC8.84□□□□□ -0.99
Hmgb3O54879 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC8.84□□□□□ -0.99
Hmgb3O54879 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC8.84□□□□□ -0.99
Hmgb3O54879 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC8.84□□□□□ -0.99
Hmgb3O54879 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC8.84□□□□□ -0.99
Hmgb3O54879 AC130829.1-201ENSMUST00000221548 494 ntBASIC8.84□□□□□ -0.99
Hmgb3O54879 Arhgef33-209ENSMUST00000225223 714 ntBASIC8.84□□□□□ -0.99
Hmgb3O54879 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Hmgb3O54879 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Hmgb3O54879 AC123665.1-201ENSMUST00000228204 438 ntBASIC8.84□□□□□ -0.99
Hmgb3O54879 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Tfcp2l1-201ENSMUST00000027629 9269 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Hmgb3O54879 Dock7-201ENSMUST00000030286 7127 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Hmgb3O54879 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Gm9244-201ENSMUST00000056767 2129 ntBASIC8.84□□□□□ -0.99
Hmgb3O54879 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC8.84□□□□□ -0.99
Hmgb3O54879 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC8.84□□□□□ -0.99
Hmgb3O54879 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Hmgb3O54879 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb3O54879 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Hmgb3O54879 Gm45124-201ENSMUST00000206723 2755 ntBASIC8.84□□□□□ -1
Hmgb3O54879 Zfp445-206ENSMUST00000216063 6189 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Hmgb3O54879 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Hmgb3O54879 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 Sncaip-203ENSMUST00000163742 3272 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
Hmgb3O54879 Aph1b-201ENSMUST00000034934 4910 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Hmgb3O54879 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 Plekha2-201ENSMUST00000064883 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 Cd22-213ENSMUST00000190617 3230 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC8.83□□□□□ -1
Hmgb3O54879 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Hmgb3O54879 Prmt7-201ENSMUST00000071592 3472 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hmgb3O54879 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms