Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6F6VAN0 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC11.11□□□□□ -0.63
Atf6F6VAN0 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Atf6F6VAN0 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6F6VAN0 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6F6VAN0 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6F6VAN0 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Atf6F6VAN0 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.11□□□□□ -0.63
Atf6F6VAN0 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.11□□□□□ -0.63
Atf6F6VAN0 Gm28388-201ENSMUST00000186262 437 ntBASIC11.11□□□□□ -0.63
Atf6F6VAN0 Gm43037-201ENSMUST00000196808 250 ntBASIC11.11□□□□□ -0.63
Atf6F6VAN0 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6F6VAN0 Gm43974-201ENSMUST00000205080 684 ntBASIC11.11□□□□□ -0.63
Atf6F6VAN0 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.11□□□□□ -0.63
Atf6F6VAN0 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.11□□□□□ -0.63
Atf6F6VAN0 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6F6VAN0 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6F6VAN0 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6F6VAN0 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6F6VAN0 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Atf6F6VAN0 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Atf6F6VAN0 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6F6VAN0 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6F6VAN0 Spata33-207ENSMUST00000212760 4074 ntBASIC11.11□□□□□ -0.63
Atf6F6VAN0 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6F6VAN0 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6F6VAN0 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6F6VAN0 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6F6VAN0 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Atf6F6VAN0 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC11.11□□□□□ -0.63
Atf6F6VAN0 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.1□□□□□ -0.63
Atf6F6VAN0 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Atf6F6VAN0 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC11.1□□□□□ -0.63
Atf6F6VAN0 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Gm23061-201ENSMUST00000102348 116 ntBASIC11.1□□□□□ -0.63
Atf6F6VAN0 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Gm15264-201ENSMUST00000118050 502 ntBASIC11.1□□□□□ -0.63
Atf6F6VAN0 Gm12274-201ENSMUST00000120062 385 ntBASIC11.1□□□□□ -0.63
Atf6F6VAN0 Gm13117-201ENSMUST00000120894 691 ntBASIC11.1□□□□□ -0.63
Atf6F6VAN0 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Gm22138-201ENSMUST00000158748 128 ntBASIC11.1□□□□□ -0.63
Atf6F6VAN0 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Gm6677-201ENSMUST00000195100 441 ntBASIC11.1□□□□□ -0.63
Atf6F6VAN0 Gm5865-201ENSMUST00000198713 637 ntBASIC11.1□□□□□ -0.63
Atf6F6VAN0 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Gm19091-201ENSMUST00000208120 978 ntBASIC11.1□□□□□ -0.63
Atf6F6VAN0 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Gm18377-201ENSMUST00000215141 607 ntBASIC11.1□□□□□ -0.63
Atf6F6VAN0 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Gm9102-201ENSMUST00000219250 465 ntBASIC11.1□□□□□ -0.63
Atf6F6VAN0 AC154828.2-201ENSMUST00000220908 1070 ntBASIC11.1□□□□□ -0.63
Atf6F6VAN0 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.1□□□□□ -0.63
Atf6F6VAN0 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC11.1□□□□□ -0.63
Atf6F6VAN0 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.1□□□□□ -0.63
Atf6F6VAN0 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Atf6F6VAN0 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.1□□□□□ -0.63
Atf6F6VAN0 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Gm38357-201ENSMUST00000195382 2464 ntBASIC11.1□□□□□ -0.63
Atf6F6VAN0 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Atf6F6VAN0 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.1□□□□□ -0.63
Atf6F6VAN0 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6F6VAN0 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.09□□□□□ -0.63
Atf6F6VAN0 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6F6VAN0 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms