Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Alppl2-201ENSMUST00000027455 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Brpf3B2KF05 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Brpf3B2KF05 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.49
Brpf3B2KF05 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Brpf3B2KF05 Upb1-201ENSMUST00000039925 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Brpf3B2KF05 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Brpf3B2KF05 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.96□□□□□ -0.49
Brpf3B2KF05 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.96□□□□□ -0.49
Brpf3B2KF05 Gm26673-201ENSMUST00000181126 3377 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Brpf3B2KF05 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.96□□□□□ -0.49
Brpf3B2KF05 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC11.96□□□□□ -0.49
Brpf3B2KF05 Gm9133-201ENSMUST00000118289 540 ntBASIC11.96□□□□□ -0.49
Brpf3B2KF05 Gm14130-201ENSMUST00000118417 987 ntBASIC11.96□□□□□ -0.49
Brpf3B2KF05 Gm12986-201ENSMUST00000119037 967 ntBASIC11.96□□□□□ -0.49
Brpf3B2KF05 Gm8302-201ENSMUST00000119217 852 ntBASIC11.96□□□□□ -0.49
Brpf3B2KF05 Gm14208-201ENSMUST00000119645 678 ntBASIC11.96□□□□□ -0.49
Brpf3B2KF05 Gm14395-201ENSMUST00000120494 563 ntBASIC11.96□□□□□ -0.49
Brpf3B2KF05 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.96□□□□□ -0.49
Brpf3B2KF05 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Brpf3B2KF05 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Brpf3B2KF05 Gm28064-201ENSMUST00000185639 858 ntBASIC11.96□□□□□ -0.49
Brpf3B2KF05 Gm37020-201ENSMUST00000195303 992 ntBASIC11.96□□□□□ -0.49
Brpf3B2KF05 Gm7319-201ENSMUST00000210047 778 ntBASIC11.96□□□□□ -0.49
Brpf3B2KF05 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.96□□□□□ -0.49
Brpf3B2KF05 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Brpf3B2KF05 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Brpf3B2KF05 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
Brpf3B2KF05 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Brpf3B2KF05 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Brpf3B2KF05 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Brpf3B2KF05 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Brpf3B2KF05 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Brpf3B2KF05 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Brpf3B2KF05 Shcbp1-201ENSMUST00000022945 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Brpf3B2KF05 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Brpf3B2KF05 Slc35f6-201ENSMUST00000062962 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Brpf3B2KF05 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Brpf3B2KF05 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.5
Brpf3B2KF05 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Brpf3B2KF05 CT033774.1-201ENSMUST00000223084 2394 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Brpf3B2KF05 AC156802.2-203ENSMUST00000226032 1906 ntBASIC11.96□□□□□ -0.5
Brpf3B2KF05 Rnft1-201ENSMUST00000020827 4452 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Brpf3B2KF05 Npnt-205ENSMUST00000117456 3383 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 Rabgef1-201ENSMUST00000026390 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Brpf3B2KF05 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 Gm10857-201ENSMUST00000195343 2794 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 Gm22920-201ENSMUST00000102175 109 ntBASIC11.95□□□□□ -0.5
Brpf3B2KF05 Gm24891-201ENSMUST00000104391 136 ntBASIC11.95□□□□□ -0.5
Brpf3B2KF05 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 Gm16219-201ENSMUST00000120096 274 ntBASIC11.95□□□□□ -0.5
Brpf3B2KF05 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 Gm4812-201ENSMUST00000182847 993 ntBASIC11.95□□□□□ -0.5
Brpf3B2KF05 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.95□□□□□ -0.5
Brpf3B2KF05 Gm5708-201ENSMUST00000196289 886 ntBASIC11.95□□□□□ -0.5
Brpf3B2KF05 Gm43822-201ENSMUST00000200285 476 ntBASIC11.95□□□□□ -0.5
Brpf3B2KF05 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.95□□□□□ -0.5
Brpf3B2KF05 Gm18042-201ENSMUST00000219887 790 ntBASIC11.95□□□□□ -0.5
Brpf3B2KF05 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 Ntng1-201ENSMUST00000051253 327 ntBASIC11.95□□□□□ -0.5
Brpf3B2KF05 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC11.95□□□□□ -0.5
Brpf3B2KF05 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 Xlr3a-201ENSMUST00000074619 1645 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Brpf3B2KF05 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC11.95□□□□□ -0.5
Brpf3B2KF05 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 AC158779.1-201ENSMUST00000228912 3861 ntBASIC11.95□□□□□ -0.5
Brpf3B2KF05 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 Gm44926-201ENSMUST00000207898 1826 ntBASIC11.95□□□□□ -0.5
Brpf3B2KF05 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Brpf3B2KF05 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Brpf3B2KF05 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brpf3B2KF05 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brpf3B2KF05 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Brpf3B2KF05 Dhcr7-202ENSMUST00000124340 2556 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Brpf3B2KF05 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brpf3B2KF05 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brpf3B2KF05 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Brpf3B2KF05 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brpf3B2KF05 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brpf3B2KF05 Pcdh15-229ENSMUST00000155701 2754 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Brpf3B2KF05 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
Brpf3B2KF05 Tmem252-201ENSMUST00000057243 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brpf3B2KF05 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brpf3B2KF05 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Brpf3B2KF05 Zfp112-201ENSMUST00000005413 3044 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms