Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Tstd2-202ENSMUST00000107772 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Xaf1-204ENSMUST00000146233 2597 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC12.63□□□□□ -0.39
Scn11aQ9R053 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Gm13777-201ENSMUST00000118208 345 ntBASIC12.63□□□□□ -0.39
Scn11aQ9R053 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Gm25694-201ENSMUST00000175448 282 ntBASIC12.63□□□□□ -0.39
Scn11aQ9R053 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC12.63□□□□□ -0.39
Scn11aQ9R053 Gm2316-201ENSMUST00000190613 921 ntBASIC12.63□□□□□ -0.39
Scn11aQ9R053 Gm17815-201ENSMUST00000198305 895 ntBASIC12.63□□□□□ -0.39
Scn11aQ9R053 Gm5189-201ENSMUST00000221796 261 ntBASIC12.63□□□□□ -0.39
Scn11aQ9R053 CT025689.5-201ENSMUST00000224316 986 ntBASIC12.63□□□□□ -0.39
Scn11aQ9R053 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn11aQ9R053 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Fam220-ps-201ENSMUST00000116535 783 ntBASIC12.62□□□□□ -0.39
Scn11aQ9R053 Gm6939-201ENSMUST00000122029 864 ntBASIC12.62□□□□□ -0.39
Scn11aQ9R053 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC12.62□□□□□ -0.39
Scn11aQ9R053 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Gm23999-201ENSMUST00000158057 104 ntBASIC12.62□□□□□ -0.39
Scn11aQ9R053 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC12.62□□□□□ -0.39
Scn11aQ9R053 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Gm6069-201ENSMUST00000196501 463 ntBASIC12.62□□□□□ -0.39
Scn11aQ9R053 Gm8083-201ENSMUST00000203976 475 ntBASIC12.62□□□□□ -0.39
Scn11aQ9R053 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC12.62□□□□□ -0.39
Scn11aQ9R053 CT025642.1-201ENSMUST00000224734 1219 ntBASIC12.62□□□□□ -0.39
Scn11aQ9R053 AC123533.3-201ENSMUST00000228056 454 ntBASIC12.62□□□□□ -0.39
Scn11aQ9R053 Gm8615-201ENSMUST00000025307 771 ntBASIC12.62□□□□□ -0.39
Scn11aQ9R053 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Gm10053-201ENSMUST00000073080 949 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Gm22341-201ENSMUST00000083775 129 ntBASIC12.62□□□□□ -0.39
Scn11aQ9R053 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.62□□□□□ -0.39
Scn11aQ9R053 Mtbp-201ENSMUST00000022998 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Trpc5-201ENSMUST00000040184 4158 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn11aQ9R053 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Scn11aQ9R053 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn11aQ9R053 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn11aQ9R053 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn11aQ9R053 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn11aQ9R053 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Scn11aQ9R053 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn11aQ9R053 Gm16480-201ENSMUST00000120439 832 ntBASIC12.61□□□□□ -0.39
Scn11aQ9R053 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC12.61□□□□□ -0.39
Scn11aQ9R053 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms