Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp2aQ9DB34 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Chmp2aQ9DB34 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Chmp2aQ9DB34 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chmp2aQ9DB34 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Chmp2aQ9DB34 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chmp2aQ9DB34 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chmp2aQ9DB34 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Chmp2aQ9DB34 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Chmp2aQ9DB34 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Chmp2aQ9DB34 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.27□□□□□ -0.6
Chmp2aQ9DB34 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Chmp2aQ9DB34 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chmp2aQ9DB34 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chmp2aQ9DB34 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.27□□□□□ -0.6
Chmp2aQ9DB34 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Gm12389-201ENSMUST00000117696 418 ntBASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Mir1893-201ENSMUST00000122565 83 ntBASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Gm25830-201ENSMUST00000158923 132 ntBASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Mir8091-201ENSMUST00000183602 139 ntBASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Gm44216-201ENSMUST00000203942 157 ntBASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Gm2594-201ENSMUST00000214774 742 ntBASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Gm6768-201ENSMUST00000022467 1878 ntBASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp2aQ9DB34 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Gm13351-201ENSMUST00000118087 414 ntBASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Gm6322-201ENSMUST00000118789 1004 ntBASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Mir7035-201ENSMUST00000184713 82 ntBASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Phtf1os-201ENSMUST00000160110 4046 ntBASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms