Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4bQ9D8B3 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Chmp4bQ9D8B3 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4bQ9D8B3 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC13.64□□□□□ -0.23
Chmp4bQ9D8B3 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4bQ9D8B3 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4bQ9D8B3 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Chmp4bQ9D8B3 Gm18294-201ENSMUST00000176980 1748 ntBASIC13.64□□□□□ -0.23
Chmp4bQ9D8B3 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4bQ9D8B3 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC13.64□□□□□ -0.23
Chmp4bQ9D8B3 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4bQ9D8B3 Gm13104-201ENSMUST00000119651 1446 ntBASIC13.64□□□□□ -0.23
Chmp4bQ9D8B3 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Chmp4bQ9D8B3 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4bQ9D8B3 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4bQ9D8B3 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4bQ9D8B3 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Chmp4bQ9D8B3 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4bQ9D8B3 Gm44369-201ENSMUST00000204543 2175 ntBASIC13.64□□□□□ -0.23
Chmp4bQ9D8B3 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Gm45675-201ENSMUST00000211202 3429 ntBASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Gm44329-201ENSMUST00000197469 112 ntBASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Gm45770-201ENSMUST00000212105 616 ntBASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Gm5403-201ENSMUST00000117105 2795 ntBASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Chmp4bQ9D8B3 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Gm42141-201ENSMUST00000196534 2172 ntBASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Gm11892-201ENSMUST00000117711 1202 ntBASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Gm13117-201ENSMUST00000120894 691 ntBASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Gm10169-201ENSMUST00000121822 348 ntBASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 AC115304.2-201ENSMUST00000226399 332 ntBASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp4bQ9D8B3 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp4bQ9D8B3 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp4bQ9D8B3 Gm37058-201ENSMUST00000193393 1644 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms