Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh15Q99PJ1 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh15Q99PJ1 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh15Q99PJ1 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh15Q99PJ1 Gm37036-201ENSMUST00000192836 2506 ntBASIC11.92□□□□□ -0.5
Pcdh15Q99PJ1 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh15Q99PJ1 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh15Q99PJ1 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh15Q99PJ1 Gm12696-201ENSMUST00000122361 905 ntBASIC11.92□□□□□ -0.5
Pcdh15Q99PJ1 Gm42780-201ENSMUST00000197083 734 ntBASIC11.92□□□□□ -0.5
Pcdh15Q99PJ1 Cyp2e1-203ENSMUST00000210235 1012 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh15Q99PJ1 Pln-205ENSMUST00000219921 531 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Pcdh15Q99PJ1 A830005F24Rik-201ENSMUST00000065465 786 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh15Q99PJ1 Tcl1b4-201ENSMUST00000000718 1031 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh15Q99PJ1 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh15Q99PJ1 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh15Q99PJ1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Zcchc9-201ENSMUST00000022121 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Cyp2c44-201ENSMUST00000026211 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Gm22777-201ENSMUST00000104091 129 ntBASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Gm15602-201ENSMUST00000116162 465 ntBASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Gm5054-201ENSMUST00000119351 453 ntBASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Gm15798-201ENSMUST00000120082 408 ntBASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Gm12551-201ENSMUST00000122073 726 ntBASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 1700057H15Rik-202ENSMUST00000143859 704 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 2810429I04Rik-204ENSMUST00000185835 923 ntTSL 3 BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Ighv1-33-201ENSMUST00000193220 350 ntBASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Gm42591-201ENSMUST00000197249 700 ntBASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Olfr371-202ENSMUST00000218663 1162 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Gm5951-201ENSMUST00000220283 504 ntBASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 AC122356.2-201ENSMUST00000226962 820 ntBASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Gm42527-201ENSMUST00000198173 1480 ntBASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Lypd4-201ENSMUST00000079306 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Gm45728-201ENSMUST00000211475 2979 ntBASIC11.91□□□□□ -0.5
Pcdh15Q99PJ1 Tes-201ENSMUST00000076654 2685 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm16574-201ENSMUST00000159301 745 ntBASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm20924-201ENSMUST00000177663 684 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm20816-201ENSMUST00000177765 684 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm20909-201ENSMUST00000178234 684 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm20825-202ENSMUST00000178396 684 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm20852-201ENSMUST00000178761 684 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm20854-201ENSMUST00000178889 1002 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm20867-201ENSMUST00000178900 684 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm21443-201ENSMUST00000179070 696 ntBASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm20747-201ENSMUST00000179137 684 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm21394-201ENSMUST00000179523 684 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm21783-201ENSMUST00000179570 684 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm21812-201ENSMUST00000179590 684 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm21721-201ENSMUST00000179595 684 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm20809-201ENSMUST00000179663 684 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm21118-201ENSMUST00000180179 684 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm20806-201ENSMUST00000180324 684 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm20909-202ENSMUST00000181205 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm26639-201ENSMUST00000181426 491 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Platr11-201ENSMUST00000182885 388 ntTSL 3 BASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm20907-201ENSMUST00000185201 693 ntBASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm20919-201ENSMUST00000185282 696 ntBASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm21785-201ENSMUST00000185440 696 ntBASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm21808-201ENSMUST00000185495 696 ntBASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm20898-201ENSMUST00000185598 693 ntBASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm20800-201ENSMUST00000185634 693 ntBASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm20902-201ENSMUST00000185643 696 ntBASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm21268-201ENSMUST00000185646 696 ntBASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm21257-201ENSMUST00000185655 696 ntBASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm21733-201ENSMUST00000185670 696 ntBASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm29075-201ENSMUST00000185717 696 ntBASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm20889-201ENSMUST00000185749 696 ntBASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm28273-201ENSMUST00000185811 695 ntBASIC11.9□□□□□ -0.5
Pcdh15Q99PJ1 Gm20799-201ENSMUST00000185833 696 ntBASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms