Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Usp11Q99K46 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.39□□□□□ -0.59
Usp11Q99K46 Gm19972-201ENSMUST00000218180 5664 ntBASIC11.39□□□□□ -0.59
Usp11Q99K46 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Usp11Q99K46 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Usp11Q99K46 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Usp11Q99K46 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Usp11Q99K46 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Usp11Q99K46 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.38□□□□□ -0.59
Usp11Q99K46 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Usp11Q99K46 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Usp11Q99K46 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Usp11Q99K46 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.38□□□□□ -0.59
Usp11Q99K46 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Usp11Q99K46 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.38□□□□□ -0.59
Usp11Q99K46 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.38□□□□□ -0.59
Usp11Q99K46 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.38□□□□□ -0.59
Usp11Q99K46 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.38□□□□□ -0.59
Usp11Q99K46 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 Gm28388-201ENSMUST00000186262 437 ntBASIC11.38□□□□□ -0.59
Usp11Q99K46 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.38□□□□□ -0.59
Usp11Q99K46 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.38□□□□□ -0.59
Usp11Q99K46 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Usp11Q99K46 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Usp11Q99K46 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.38□□□□□ -0.59
Usp11Q99K46 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Usp11Q99K46 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Usp11Q99K46 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.38□□□□□ -0.59
Usp11Q99K46 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.38□□□□□ -0.59
Usp11Q99K46 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Usp11Q99K46 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.38□□□□□ -0.59
Usp11Q99K46 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Usp11Q99K46 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC11.37□□□□□ -0.59
Usp11Q99K46 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Usp11Q99K46 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Usp11Q99K46 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.37□□□□□ -0.59
Usp11Q99K46 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Usp11Q99K46 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Usp11Q99K46 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Usp11Q99K46 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Usp11Q99K46 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Usp11Q99K46 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Usp11Q99K46 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Usp11Q99K46 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.37□□□□□ -0.59
Usp11Q99K46 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.37□□□□□ -0.59
Usp11Q99K46 Gm24398-201ENSMUST00000157870 109 ntBASIC11.37□□□□□ -0.59
Usp11Q99K46 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Usp11Q99K46 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Usp11Q99K46 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.37□□□□□ -0.59
Usp11Q99K46 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.37□□□□□ -0.59
Usp11Q99K46 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Usp11Q99K46 Gm30946-201ENSMUST00000198288 724 ntBASIC11.37□□□□□ -0.59
Usp11Q99K46 Gm44323-201ENSMUST00000198689 129 ntBASIC11.37□□□□□ -0.59
Usp11Q99K46 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.37□□□□□ -0.59
Usp11Q99K46 Gm23680-201ENSMUST00000083162 164 ntBASIC11.37□□□□□ -0.59
Usp11Q99K46 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Usp11Q99K46 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Usp11Q99K46 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Usp11Q99K46 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Usp11Q99K46 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Usp11Q99K46 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Usp11Q99K46 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Usp11Q99K46 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Usp11Q99K46 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Usp11Q99K46 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Usp11Q99K46 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Usp11Q99K46 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Usp11Q99K46 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Usp11Q99K46 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Usp11Q99K46 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Usp11Q99K46 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Usp11Q99K46 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Usp11Q99K46 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Usp11Q99K46 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Usp11Q99K46 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Usp11Q99K46 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Usp11Q99K46 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms