Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm43636-201ENSMUST00000201501 2235 ntBASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Gm18294-201ENSMUST00000176980 1748 ntBASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Gm6024-201ENSMUST00000117850 1558 ntBASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Gm25053-201ENSMUST00000103982 133 ntBASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Gm25922-201ENSMUST00000104281 130 ntBASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Gm9673-201ENSMUST00000119287 781 ntBASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Gm13937-201ENSMUST00000121000 988 ntBASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Gm24679-201ENSMUST00000158762 111 ntBASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Gm28833-201ENSMUST00000189671 559 ntBASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Gm30946-201ENSMUST00000198288 724 ntBASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Gm25053-202ENSMUST00000199731 132 ntBASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Gm43671-201ENSMUST00000200422 433 ntBASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 AC129975.1-201ENSMUST00000224816 592 ntBASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 AC129308.3-201ENSMUST00000225652 524 ntBASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Gm5805-201ENSMUST00000072779 456 ntBASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Gm28693-201ENSMUST00000189622 2638 ntBASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga4Q91XY4 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Erich3-203ENSMUST00000189969 3460 ntBASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Gm17213-201ENSMUST00000165161 1360 ntBASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Gm9133-201ENSMUST00000118289 540 ntBASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Gm13668-201ENSMUST00000119237 1001 ntBASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Mir1905-201ENSMUST00000122779 82 ntBASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Gm4811-201ENSMUST00000220879 1220 ntBASIC10.69□□□□□ -0.7
Pcdhga4Q91XY4 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms