Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Gm7742-201ENSMUST00000167648 1527 ntBASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Gm7732-201ENSMUST00000170486 1527 ntBASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Gm7740-201ENSMUST00000186171 1527 ntBASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Gm7736-201ENSMUST00000096981 1527 ntBASIC12.57□□□□□ -0.4
Alx1Q8C8B0 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC12.57□□□□□ -0.4
Alx1Q8C8B0 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Gm38357-201ENSMUST00000195382 2464 ntBASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Gm11996-201ENSMUST00000117538 915 ntBASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Gm8659-201ENSMUST00000120024 1084 ntBASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Gm11354-201ENSMUST00000121974 422 ntBASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Gm22344-201ENSMUST00000122642 278 ntBASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Gm25569-201ENSMUST00000157175 131 ntBASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Gm18123-201ENSMUST00000210874 822 ntBASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Gm18122-201ENSMUST00000211390 904 ntBASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Mir483-201ENSMUST00000093631 73 ntBASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Gm44369-201ENSMUST00000204543 2175 ntBASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx1Q8C8B0 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Gm37242-201ENSMUST00000191873 2085 ntBASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Gm22582-201ENSMUST00000102283 94 ntBASIC12.55□□□□□ -0.4
Alx1Q8C8B0 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Gm8482-201ENSMUST00000117972 471 ntBASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Gm11578-201ENSMUST00000118530 459 ntBASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Gm13841-201ENSMUST00000118829 483 ntBASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Gm11449-201ENSMUST00000119175 476 ntBASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Gm8210-201ENSMUST00000178557 483 ntBASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Gm15454-201ENSMUST00000179718 483 ntBASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Mir8111-201ENSMUST00000184463 137 ntBASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Gm8625-201ENSMUST00000194185 1077 ntBASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Gm42803-201ENSMUST00000201051 451 ntBASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Gm45310-201ENSMUST00000210436 275 ntBASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Gm6344-201ENSMUST00000075962 483 ntBASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Spata33-207ENSMUST00000212760 4074 ntBASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Alx1Q8C8B0 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms