Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Gm7719-201ENSMUST00000182374 975 ntBASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Gm34023-201ENSMUST00000195539 217 ntBASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Gm42710-201ENSMUST00000200608 985 ntBASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Gm2594-201ENSMUST00000214774 742 ntBASIC11.87□□□□□ -0.51
Trim9Q8C7M3 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Gm18968-201ENSMUST00000221319 862 ntBASIC11.87□□□□□ -0.51
Trim9Q8C7M3 AC158392.3-201ENSMUST00000224271 1284 ntBASIC11.87□□□□□ -0.51
Trim9Q8C7M3 AC154431.1-201ENSMUST00000224910 880 ntBASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Gm37242-201ENSMUST00000191873 2085 ntBASIC11.87□□□□□ -0.51
Trim9Q8C7M3 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Gm14807-201ENSMUST00000116640 983 ntBASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Gm8918-201ENSMUST00000190587 1087 ntBASIC11.86□□□□□ -0.51
Trim9Q8C7M3 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Gm45310-201ENSMUST00000210436 275 ntBASIC11.86□□□□□ -0.51
Trim9Q8C7M3 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim9Q8C7M3 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms