Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 AC162932.1-201ENSMUST00000219209 872 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 AC125539.1-202ENSMUST00000226449 670 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Gm7255-201ENSMUST00000187371 908 ntBASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Gm18706-201ENSMUST00000210053 1066 ntBASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Gm45500-201ENSMUST00000211676 803 ntBASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 CT010480.2-201ENSMUST00000225424 737 ntBASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Pcdh19Q80TF3 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Gfra2-203ENSMUST00000227697 1323 ntBASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Gm11475-201ENSMUST00000118482 476 ntBASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Gm13039-201ENSMUST00000118638 794 ntBASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Gm16288-201ENSMUST00000137940 367 ntBASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Mipep-ps-201ENSMUST00000177439 291 ntBASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Gm9162-201ENSMUST00000182081 991 ntBASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms