Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm12418-201ENSMUST00000118116 942 ntBASIC13.87□□□□□ -0.19
Clcn1Q64347 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clcn1Q64347 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Clcn1Q64347 Gm33080-201ENSMUST00000205429 172 ntBASIC13.87□□□□□ -0.19
Clcn1Q64347 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC13.87□□□□□ -0.19
Clcn1Q64347 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC13.87□□□□□ -0.19
Clcn1Q64347 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC13.87□□□□□ -0.19
Clcn1Q64347 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcn1Q64347 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcn1Q64347 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcn1Q64347 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Clcn1Q64347 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcn1Q64347 Gm5513-201ENSMUST00000072982 1218 ntBASIC13.87□□□□□ -0.19
Clcn1Q64347 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Clcn1Q64347 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.87□□□□□ -0.19
Clcn1Q64347 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcn1Q64347 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clcn1Q64347 CT009713.5-203ENSMUST00000224218 2079 ntBASIC13.87□□□□□ -0.19
Clcn1Q64347 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcn1Q64347 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcn1Q64347 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcn1Q64347 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcn1Q64347 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Clcn1Q64347 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Clcn1Q64347 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clcn1Q64347 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clcn1Q64347 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcn1Q64347 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Clcn1Q64347 Gm26660-202ENSMUST00000223620 4112 ntBASIC13.87□□□□□ -0.19
Clcn1Q64347 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcn1Q64347 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC13.87□□□□□ -0.19
Clcn1Q64347 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcn1Q64347 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcn1Q64347 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcn1Q64347 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Clcn1Q64347 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Clcn1Q64347 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Gm11919-201ENSMUST00000117609 721 ntBASIC13.86□□□□□ -0.19
Clcn1Q64347 Gm15707-201ENSMUST00000118804 996 ntBASIC13.86□□□□□ -0.19
Clcn1Q64347 Gm9440-201ENSMUST00000119667 539 ntBASIC13.86□□□□□ -0.19
Clcn1Q64347 Gm25109-201ENSMUST00000122474 114 ntBASIC13.86□□□□□ -0.19
Clcn1Q64347 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC13.86□□□□□ -0.19
Clcn1Q64347 Gm7627-201ENSMUST00000183205 999 ntBASIC13.86□□□□□ -0.19
Clcn1Q64347 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC13.86□□□□□ -0.19
Clcn1Q64347 Gm44640-201ENSMUST00000206894 247 ntBASIC13.86□□□□□ -0.19
Clcn1Q64347 Gm45481-201ENSMUST00000209717 877 ntBASIC13.86□□□□□ -0.19
Clcn1Q64347 Gm9619-201ENSMUST00000211587 762 ntBASIC13.86□□□□□ -0.19
Clcn1Q64347 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC13.86□□□□□ -0.19
Clcn1Q64347 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Clcn1Q64347 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Clcn1Q64347 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Clcn1Q64347 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC13.86□□□□□ -0.19
Clcn1Q64347 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clcn1Q64347 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC13.86□□□□□ -0.19
Clcn1Q64347 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clcn1Q64347 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC13.85□□□□□ -0.19
Clcn1Q64347 Gm5159-201ENSMUST00000212733 1652 ntBASIC13.85□□□□□ -0.19
Clcn1Q64347 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clcn1Q64347 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clcn1Q64347 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
Clcn1Q64347 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clcn1Q64347 AC129336.2-201ENSMUST00000218053 3086 ntBASIC13.85□□□□□ -0.19
Clcn1Q64347 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clcn1Q64347 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clcn1Q64347 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clcn1Q64347 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clcn1Q64347 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clcn1Q64347 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clcn1Q64347 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clcn1Q64347 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Clcn1Q64347 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clcn1Q64347 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms