Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ift88Q61371 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ift88Q61371 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ift88Q61371 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ift88Q61371 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC11.89□□□□□ -0.51
Ift88Q61371 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.89□□□□□ -0.51
Ift88Q61371 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ift88Q61371 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ift88Q61371 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ift88Q61371 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ift88Q61371 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ift88Q61371 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ift88Q61371 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.89□□□□□ -0.51
Ift88Q61371 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ift88Q61371 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ift88Q61371 Gm11411-201ENSMUST00000117951 719 ntBASIC11.89□□□□□ -0.51
Ift88Q61371 Gm16518-201ENSMUST00000117960 508 ntBASIC11.89□□□□□ -0.51
Ift88Q61371 Gm14942-201ENSMUST00000119642 336 ntBASIC11.89□□□□□ -0.51
Ift88Q61371 Gm15197-201ENSMUST00000120526 478 ntBASIC11.89□□□□□ -0.51
Ift88Q61371 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.89□□□□□ -0.51
Ift88Q61371 Mir1893-201ENSMUST00000122565 83 ntBASIC11.89□□□□□ -0.51
Ift88Q61371 Gm10051-201ENSMUST00000145209 414 ntBASIC11.89□□□□□ -0.51
Ift88Q61371 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC11.89□□□□□ -0.51
Ift88Q61371 Gm25343-201ENSMUST00000157460 107 ntBASIC11.89□□□□□ -0.51
Ift88Q61371 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC11.89□□□□□ -0.51
Ift88Q61371 Gm5244-201ENSMUST00000164001 339 ntBASIC11.89□□□□□ -0.51
Ift88Q61371 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.89□□□□□ -0.51
Ift88Q61371 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.89□□□□□ -0.51
Ift88Q61371 Gm8197-202ENSMUST00000193422 934 ntBASIC11.89□□□□□ -0.51
Ift88Q61371 Gm6677-201ENSMUST00000195100 441 ntBASIC11.89□□□□□ -0.51
Ift88Q61371 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Ift88Q61371 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.89□□□□□ -0.51
Ift88Q61371 Gm5363-201ENSMUST00000211927 938 ntBASIC11.89□□□□□ -0.51
Ift88Q61371 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ift88Q61371 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC11.89□□□□□ -0.51
Ift88Q61371 Spcs1-203ENSMUST00000226374 592 ntBASIC11.89□□□□□ -0.51
Ift88Q61371 Gm10263-201ENSMUST00000085163 300 ntBASIC11.89□□□□□ -0.51
Ift88Q61371 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.89□□□□□ -0.51
Ift88Q61371 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ift88Q61371 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ift88Q61371 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ift88Q61371 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ift88Q61371 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ift88Q61371 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ift88Q61371 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ift88Q61371 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ift88Q61371 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ift88Q61371 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Ift88Q61371 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC11.88□□□□□ -0.51
Ift88Q61371 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ift88Q61371 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ift88Q61371 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ift88Q61371 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC11.88□□□□□ -0.51
Ift88Q61371 Gm9062-201ENSMUST00000117712 727 ntBASIC11.88□□□□□ -0.51
Ift88Q61371 Gm15554-201ENSMUST00000120406 913 ntBASIC11.88□□□□□ -0.51
Ift88Q61371 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.88□□□□□ -0.51
Ift88Q61371 Gm3828-201ENSMUST00000121817 257 ntBASIC11.88□□□□□ -0.51
Ift88Q61371 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.88□□□□□ -0.51
Ift88Q61371 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC11.88□□□□□ -0.51
Ift88Q61371 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC11.88□□□□□ -0.51
Ift88Q61371 Gm43163-201ENSMUST00000196571 442 ntBASIC11.88□□□□□ -0.51
Ift88Q61371 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.88□□□□□ -0.51
Ift88Q61371 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.88□□□□□ -0.51
Ift88Q61371 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.88□□□□□ -0.51
Ift88Q61371 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Gm25580-201ENSMUST00000083409 327 ntBASIC11.88□□□□□ -0.51
Ift88Q61371 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ift88Q61371 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ift88Q61371 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ift88Q61371 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ift88Q61371 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms