Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Gm6425-201ENSMUST00000136332 790 ntBASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Gm44498-201ENSMUST00000199509 111 ntBASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Gm6352-201ENSMUST00000203583 1134 ntBASIC12.95□□□□□ -0.34
Vps54Q5SPW0 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC12.95□□□□□ -0.34
Vps54Q5SPW0 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Gm12337-201ENSMUST00000119634 400 ntBASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Gm20414-201ENSMUST00000172918 646 ntBASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Gm5267-201ENSMUST00000191574 1045 ntBASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Gm38313-201ENSMUST00000191953 1266 ntBASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Ighv5-8-202ENSMUST00000191967 337 ntBASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Gm43564-201ENSMUST00000196185 211 ntBASIC12.94□□□□□ -0.34
Vps54Q5SPW0 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Gm18466-201ENSMUST00000209147 499 ntBASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps54Q5SPW0 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Gm11544-201ENSMUST00000120215 382 ntBASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Gm11993-201ENSMUST00000121861 820 ntBASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Gm7985-201ENSMUST00000183329 981 ntBASIC12.93□□□□□ -0.34
Vps54Q5SPW0 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.93□□□□□ -0.34
Vps54Q5SPW0 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms