Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC8.82□□□□□ -1
Trim63Q38HM4 Nnt-206ENSMUST00000223268 3339 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Tbc1d24-204ENSMUST00000167791 4383 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC8.82□□□□□ -1
Trim63Q38HM4 Zfp936-203ENSMUST00000202535 3112 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Rfx6-202ENSMUST00000122922 3464 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Trim63Q38HM4 Ick-204ENSMUST00000118869 2540 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Pigq-202ENSMUST00000097368 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 AC124561.1-202ENSMUST00000228652 1929 ntBASIC8.82□□□□□ -1
Trim63Q38HM4 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Trim63Q38HM4 Plekhg1-202ENSMUST00000120274 7369 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Trim63Q38HM4 Zfp469-202ENSMUST00000187142 3082 ntBASIC8.82□□□□□ -1
Trim63Q38HM4 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC8.81□□□□□ -1
Trim63Q38HM4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC8.81□□□□□ -1
Trim63Q38HM4 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Ablim1-207ENSMUST00000111529 5927 ntTSL 5 BASIC8.81□□□□□ -1
Trim63Q38HM4 Gm28624-201ENSMUST00000186430 2131 ntBASIC8.81□□□□□ -1
Trim63Q38HM4 Pcx-204ENSMUST00000224726 4034 ntAPPRIS P3 BASIC8.81□□□□□ -1
Trim63Q38HM4 Mrps5-201ENSMUST00000028852 4481 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Trim63Q38HM4 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Fut10-204ENSMUST00000161788 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Tcf24-201ENSMUST00000097824 2639 ntBASIC8.81□□□□□ -1
Trim63Q38HM4 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Trim63Q38HM4 Tifab-202ENSMUST00000225063 2718 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trim63Q38HM4 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Foxn3-201ENSMUST00000046859 7705 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Gm15264-201ENSMUST00000118050 502 ntBASIC8.81□□□□□ -1
Trim63Q38HM4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Trim63Q38HM4 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Gm37922-201ENSMUST00000195596 455 ntBASIC8.81□□□□□ -1
Trim63Q38HM4 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC8.81□□□□□ -1
Trim63Q38HM4 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Gm6562-201ENSMUST00000221903 464 ntBASIC8.81□□□□□ -1
Trim63Q38HM4 Gm19163-201ENSMUST00000223313 780 ntBASIC8.81□□□□□ -1
Trim63Q38HM4 AC069562.3-201ENSMUST00000225387 587 ntBASIC8.81□□□□□ -1
Trim63Q38HM4 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Olfr312-201ENSMUST00000078217 927 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trim63Q38HM4 Gm22058-201ENSMUST00000083393 310 ntBASIC8.81□□□□□ -1
Trim63Q38HM4 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trim63Q38HM4 Trpm1-202ENSMUST00000177102 2928 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trim63Q38HM4 Gramd4-201ENSMUST00000088931 4115 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Cdh13-201ENSMUST00000117160 3785 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Utp6-201ENSMUST00000043152 3877 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Gabpa-202ENSMUST00000114184 2202 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC8.81□□□□□ -1
Trim63Q38HM4 Sox2ot-211ENSMUST00000197977 2970 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC8.81□□□□□ -1
Trim63Q38HM4 Nos1-202ENSMUST00000102557 4591 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Trim63Q38HM4 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Osbpl1a-204ENSMUST00000119043 2522 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 AC156802.2-201ENSMUST00000225239 5740 ntBASIC8.81□□□□□ -1
Trim63Q38HM4 Crat-203ENSMUST00000102855 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Psmb11-201ENSMUST00000097177 4247 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trim63Q38HM4 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trim63Q38HM4 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Trim63Q38HM4 Gimap8-203ENSMUST00000203509 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC8.8□□□□□ -1
Trim63Q38HM4 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Pcdhb5-201ENSMUST00000078271 3535 ntAPPRIS P1 BASIC8.8□□□□□ -1
Trim63Q38HM4 Cdc6-202ENSMUST00000093937 2559 ntAPPRIS P4 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Atcay-201ENSMUST00000047408 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 5330411J11Rik-201ENSMUST00000137162 1635 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC8.8□□□□□ -1
Trim63Q38HM4 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC8.8□□□□□ -1
Trim63Q38HM4 Olfr1219-202ENSMUST00000213724 5669 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Trim63Q38HM4 Pla2r1-201ENSMUST00000112525 7112 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Tmod3-201ENSMUST00000072232 3667 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Orai2-202ENSMUST00000196454 3990 ntTSL 5 BASIC8.8□□□□□ -1
Trim63Q38HM4 Osbpl9-218ENSMUST00000162787 2408 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Vti1a-202ENSMUST00000223690 4175 ntBASIC8.8□□□□□ -1
Trim63Q38HM4 Gm37459-201ENSMUST00000192259 2840 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Ptpn7-202ENSMUST00000167080 2945 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Il17rd-205ENSMUST00000226105 2923 ntBASIC8.8□□□□□ -1
Trim63Q38HM4 Grm3-201ENSMUST00000004076 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Epha5-203ENSMUST00000113399 5166 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Trim63Q38HM4 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC8.8□□□□□ -1
Trim63Q38HM4 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Dnmt3b-207ENSMUST00000109771 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Bcas3-206ENSMUST00000108062 3724 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Trim63Q38HM4 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC8.8□□□□□ -1
Trim63Q38HM4 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC8.8□□□□□ -1
Trim63Q38HM4 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trim63Q38HM4 Gm26356-201ENSMUST00000158217 283 ntBASIC8.8□□□□□ -1
Trim63Q38HM4 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms