Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC8.39□□□□□ -1.07
Cdx4Q07424 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Cdx4Q07424 Gm25880-201ENSMUST00000104331 132 ntBASIC8.39□□□□□ -1.07
Cdx4Q07424 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC8.39□□□□□ -1.07
Cdx4Q07424 Gm14395-201ENSMUST00000120494 563 ntBASIC8.39□□□□□ -1.07
Cdx4Q07424 Gm13117-201ENSMUST00000120894 691 ntBASIC8.39□□□□□ -1.07
Cdx4Q07424 Gm12628-201ENSMUST00000122193 382 ntBASIC8.39□□□□□ -1.07
Cdx4Q07424 Mup-ps29-201ENSMUST00000122281 202 ntBASIC8.39□□□□□ -1.07
Cdx4Q07424 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC8.39□□□□□ -1.07
Cdx4Q07424 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC8.39□□□□□ -1.07
Cdx4Q07424 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Gm22877-201ENSMUST00000175451 105 ntBASIC8.39□□□□□ -1.07
Cdx4Q07424 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Mir7051-201ENSMUST00000184167 73 ntBASIC8.39□□□□□ -1.07
Cdx4Q07424 Gm19087-201ENSMUST00000191430 946 ntBASIC8.39□□□□□ -1.07
Cdx4Q07424 Gm37597-201ENSMUST00000191853 382 ntBASIC8.39□□□□□ -1.07
Cdx4Q07424 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC8.39□□□□□ -1.07
Cdx4Q07424 Gm18561-201ENSMUST00000206027 804 ntBASIC8.39□□□□□ -1.07
Cdx4Q07424 Gm17825-201ENSMUST00000206836 794 ntBASIC8.39□□□□□ -1.07
Cdx4Q07424 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC8.39□□□□□ -1.07
Cdx4Q07424 Gm7183-201ENSMUST00000213870 1005 ntBASIC8.39□□□□□ -1.07
Cdx4Q07424 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC8.39□□□□□ -1.07
Cdx4Q07424 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 CT009527.1-201ENSMUST00000224205 339 ntBASIC8.39□□□□□ -1.07
Cdx4Q07424 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Pzp-201ENSMUST00000112132 4681 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Cdx4Q07424 L1cam-203ENSMUST00000114430 5126 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Cdx4Q07424 AC154171.2-201ENSMUST00000225219 2652 ntBASIC8.39□□□□□ -1.07
Cdx4Q07424 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Cdx4Q07424 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Cdx4Q07424 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Gm18210-201ENSMUST00000209001 1524 ntBASIC8.39□□□□□ -1.07
Cdx4Q07424 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cdx4Q07424 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Cdx4Q07424 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Cdx4Q07424 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cdx4Q07424 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cdx4Q07424 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC8.38□□□□□ -1.07
Cdx4Q07424 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cdx4Q07424 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cdx4Q07424 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cdx4Q07424 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC8.38□□□□□ -1.07
Cdx4Q07424 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cdx4Q07424 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cdx4Q07424 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cdx4Q07424 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cdx4Q07424 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Cdx4Q07424 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Cdx4Q07424 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC8.38□□□□□ -1.07
Cdx4Q07424 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Cdx4Q07424 Gm14270-201ENSMUST00000118388 846 ntBASIC8.38□□□□□ -1.07
Cdx4Q07424 Gm11422-201ENSMUST00000118925 1103 ntBASIC8.38□□□□□ -1.07
Cdx4Q07424 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC8.38□□□□□ -1.07
Cdx4Q07424 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
Cdx4Q07424 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC8.38□□□□□ -1.07
Cdx4Q07424 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC8.38□□□□□ -1.07
Cdx4Q07424 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Cdx4Q07424 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC8.38□□□□□ -1.07
Cdx4Q07424 Gm19246-201ENSMUST00000173599 255 ntBASIC8.38□□□□□ -1.07
Cdx4Q07424 Gm3671-201ENSMUST00000182463 1007 ntBASIC8.38□□□□□ -1.07
Cdx4Q07424 Gm9135-201ENSMUST00000182963 990 ntBASIC8.38□□□□□ -1.07
Cdx4Q07424 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC8.38□□□□□ -1.07
Cdx4Q07424 Gm28388-201ENSMUST00000186262 437 ntBASIC8.38□□□□□ -1.07
Cdx4Q07424 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Cdx4Q07424 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC8.38□□□□□ -1.07
Cdx4Q07424 Gm8436-201ENSMUST00000210152 1080 ntBASIC8.38□□□□□ -1.07
Cdx4Q07424 Gm5749-201ENSMUST00000210673 1090 ntBASIC8.38□□□□□ -1.07
Cdx4Q07424 Ap3s1-202ENSMUST00000224622 978 ntBASIC8.38□□□□□ -1.07
Cdx4Q07424 AC099645.1-201ENSMUST00000226476 1105 ntBASIC8.38□□□□□ -1.07
Cdx4Q07424 Gm10020-201ENSMUST00000081993 612 ntBASIC8.38□□□□□ -1.07
Cdx4Q07424 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Cdx4Q07424 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cdx4Q07424 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cdx4Q07424 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Cdx4Q07424 Gcc2-201ENSMUST00000057659 6547 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cdx4Q07424 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms