Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC9.04□□□□□ -0.96
Npas1P97459 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Npas1P97459 Gm44262-201ENSMUST00000204969 372 ntBASIC9.04□□□□□ -0.96
Npas1P97459 Gm45575-201ENSMUST00000210283 548 ntBASIC9.04□□□□□ -0.96
Npas1P97459 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Npas1P97459 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.04□□□□□ -0.96
Npas1P97459 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC9.04□□□□□ -0.96
Npas1P97459 AC112945.1-201ENSMUST00000226413 514 ntBASIC9.04□□□□□ -0.96
Npas1P97459 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Npas1P97459 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Npas1P97459 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Npas1P97459 Ndst3-207ENSMUST00000172537 3152 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Npas1P97459 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Npas1P97459 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Npas1P97459 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Npas1P97459 Xab2-201ENSMUST00000019614 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Npas1P97459 Tigd4-201ENSMUST00000062623 3459 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Npas1P97459 Crry-ps-201ENSMUST00000079090 1309 ntBASIC9.04□□□□□ -0.96
Npas1P97459 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Npas1P97459 Prdx6-202ENSMUST00000071718 2387 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Npas1P97459 Boc-201ENSMUST00000114634 4451 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 Gm6015-201ENSMUST00000217493 1586 ntBASIC9.03□□□□□ -0.96
Npas1P97459 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 Pwp1-201ENSMUST00000001836 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 Ctc1-201ENSMUST00000021278 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC9.03□□□□□ -0.96
Npas1P97459 Gm24255-201ENSMUST00000104481 128 ntBASIC9.03□□□□□ -0.96
Npas1P97459 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Npas1P97459 Gm12857-201ENSMUST00000117678 592 ntBASIC9.03□□□□□ -0.96
Npas1P97459 Gm12012-201ENSMUST00000118857 1066 ntBASIC9.03□□□□□ -0.96
Npas1P97459 Gm15711-201ENSMUST00000118889 535 ntBASIC9.03□□□□□ -0.96
Npas1P97459 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC9.03□□□□□ -0.96
Npas1P97459 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC9.03□□□□□ -0.96
Npas1P97459 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC9.03□□□□□ -0.96
Npas1P97459 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC9.03□□□□□ -0.96
Npas1P97459 Gm26047-201ENSMUST00000157308 113 ntBASIC9.03□□□□□ -0.96
Npas1P97459 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Npas1P97459 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC9.03□□□□□ -0.96
Npas1P97459 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 Gm26047-202ENSMUST00000198840 115 ntBASIC9.03□□□□□ -0.96
Npas1P97459 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC9.03□□□□□ -0.96
Npas1P97459 Gm44974-201ENSMUST00000206387 1279 ntBASIC9.03□□□□□ -0.96
Npas1P97459 Gm13097-201ENSMUST00000210722 397 ntBASIC9.03□□□□□ -0.96
Npas1P97459 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 Gm270-201ENSMUST00000223010 976 ntBASIC9.03□□□□□ -0.96
Npas1P97459 AC159002.1-201ENSMUST00000226714 924 ntBASIC9.03□□□□□ -0.96
Npas1P97459 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC9.03□□□□□ -0.96
Npas1P97459 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC9.03□□□□□ -0.96
Npas1P97459 Dnm2-203ENSMUST00000115404 3455 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
Npas1P97459 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 Gm3372-201ENSMUST00000198806 1792 ntBASIC9.03□□□□□ -0.96
Npas1P97459 Pla2g16-201ENSMUST00000025925 3523 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC9.03□□□□□ -0.96
Npas1P97459 Gm5171-201ENSMUST00000214944 1415 ntBASIC9.03□□□□□ -0.96
Npas1P97459 Treml2-201ENSMUST00000170941 4509 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 Gm13812-201ENSMUST00000118061 1347 ntBASIC9.03□□□□□ -0.96
Npas1P97459 Gm13810-201ENSMUST00000118584 1347 ntBASIC9.03□□□□□ -0.96
Npas1P97459 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 Xpnpep3-201ENSMUST00000041609 3236 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 Gm15496-201ENSMUST00000129578 2456 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Npas1P97459 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Npas1P97459 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Npas1P97459 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Npas1P97459 Gm30373-201ENSMUST00000215774 3500 ntTSL 5 BASIC9.02□□□□□ -0.96
Npas1P97459 Mthfd1-206ENSMUST00000220046 3040 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Npas1P97459 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Npas1P97459 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Npas1P97459 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Npas1P97459 Scrn3-201ENSMUST00000090811 3309 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Npas1P97459 Nt5c1b-217ENSMUST00000219826 2023 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Npas1P97459 Gm12912-201ENSMUST00000121596 1381 ntBASIC9.02□□□□□ -0.97
Npas1P97459 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC9.02□□□□□ -0.97
Npas1P97459 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC9.02□□□□□ -0.97
Npas1P97459 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Npas1P97459 Uhrf1-204ENSMUST00000113039 3391 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Npas1P97459 Cbr4-201ENSMUST00000034058 4309 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Npas1P97459 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Npas1P97459 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Npas1P97459 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Npas1P97459 Gm5159-201ENSMUST00000212733 1652 ntBASIC9.02□□□□□ -0.97
Npas1P97459 Cdkl1-201ENSMUST00000021377 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Npas1P97459 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Npas1P97459 Gm25148-201ENSMUST00000104611 123 ntBASIC9.02□□□□□ -0.97
Npas1P97459 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Npas1P97459 Gm24749-201ENSMUST00000157838 343 ntBASIC9.02□□□□□ -0.97
Npas1P97459 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC9.02□□□□□ -0.97
Npas1P97459 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms