Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC11.72□□□□□ -0.53
CiitaP79621 Gm9507-202ENSMUST00000180157 654 ntBASIC11.72□□□□□ -0.53
CiitaP79621 Gm5870-201ENSMUST00000196461 282 ntBASIC11.72□□□□□ -0.53
CiitaP79621 Gm42710-201ENSMUST00000200608 985 ntBASIC11.72□□□□□ -0.53
CiitaP79621 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Gm18466-201ENSMUST00000209147 499 ntBASIC11.72□□□□□ -0.53
CiitaP79621 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC11.72□□□□□ -0.53
CiitaP79621 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 AC124581.2-201ENSMUST00000225459 282 ntBASIC11.72□□□□□ -0.53
CiitaP79621 AC154806.7-201ENSMUST00000227998 202 ntBASIC11.72□□□□□ -0.53
CiitaP79621 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.72□□□□□ -0.53
CiitaP79621 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
CiitaP79621 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
CiitaP79621 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CiitaP79621 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
CiitaP79621 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CiitaP79621 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
CiitaP79621 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CiitaP79621 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CiitaP79621 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CiitaP79621 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CiitaP79621 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CiitaP79621 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
CiitaP79621 Gm14274-201ENSMUST00000117182 615 ntBASIC11.71□□□□□ -0.53
CiitaP79621 Gm11573-201ENSMUST00000119956 394 ntBASIC11.71□□□□□ -0.53
CiitaP79621 Gm11544-201ENSMUST00000120215 382 ntBASIC11.71□□□□□ -0.53
CiitaP79621 Gm11354-201ENSMUST00000121974 422 ntBASIC11.71□□□□□ -0.53
CiitaP79621 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CiitaP79621 Gm28671-201ENSMUST00000187036 692 ntBASIC11.71□□□□□ -0.53
CiitaP79621 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CiitaP79621 Gm42732-201ENSMUST00000202887 1197 ntBASIC11.71□□□□□ -0.53
CiitaP79621 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC11.71□□□□□ -0.53
CiitaP79621 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CiitaP79621 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CiitaP79621 n-R5s71-201ENSMUST00000093668 119 ntBASIC11.71□□□□□ -0.53
CiitaP79621 Gm6478-201ENSMUST00000099450 742 ntBASIC11.71□□□□□ -0.53
CiitaP79621 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CiitaP79621 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.71□□□□□ -0.54
CiitaP79621 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
CiitaP79621 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CiitaP79621 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CiitaP79621 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CiitaP79621 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
CiitaP79621 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.7□□□□□ -0.54
CiitaP79621 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.7□□□□□ -0.54
CiitaP79621 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC11.7□□□□□ -0.54
CiitaP79621 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC11.7□□□□□ -0.54
CiitaP79621 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC11.7□□□□□ -0.54
CiitaP79621 Gm7593-201ENSMUST00000187246 644 ntBASIC11.7□□□□□ -0.54
CiitaP79621 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Gm44155-201ENSMUST00000203923 412 ntBASIC11.7□□□□□ -0.54
CiitaP79621 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC11.7□□□□□ -0.54
CiitaP79621 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.7□□□□□ -0.54
CiitaP79621 CT030195.2-201ENSMUST00000226074 1286 ntBASIC11.7□□□□□ -0.54
CiitaP79621 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Gm25514-201ENSMUST00000083860 135 ntBASIC11.7□□□□□ -0.54
CiitaP79621 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
CiitaP79621 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Gm5697-201ENSMUST00000122295 2482 ntBASIC11.7□□□□□ -0.54
CiitaP79621 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
CiitaP79621 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CiitaP79621 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms