Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
NrlP54846 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.54□□□□□ -0.56
NrlP54846 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
NrlP54846 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
NrlP54846 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NrlP54846 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NrlP54846 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
NrlP54846 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
NrlP54846 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.54□□□□□ -0.56
NrlP54846 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.54□□□□□ -0.56
NrlP54846 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NrlP54846 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NrlP54846 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NrlP54846 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
NrlP54846 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NrlP54846 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NrlP54846 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
NrlP54846 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
NrlP54846 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NrlP54846 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
NrlP54846 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.53□□□□□ -0.56
NrlP54846 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
NrlP54846 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
NrlP54846 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
NrlP54846 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.53□□□□□ -0.56
NrlP54846 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
NrlP54846 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.53□□□□□ -0.56
NrlP54846 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
NrlP54846 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Mir1249-201ENSMUST00000116791 98 ntBASIC11.53□□□□□ -0.56
NrlP54846 Gm9166-201ENSMUST00000120293 561 ntBASIC11.53□□□□□ -0.56
NrlP54846 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC11.53□□□□□ -0.56
NrlP54846 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC11.53□□□□□ -0.56
NrlP54846 Gm6518-201ENSMUST00000208450 342 ntBASIC11.53□□□□□ -0.56
NrlP54846 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
NrlP54846 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
NrlP54846 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.53□□□□□ -0.56
NrlP54846 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
NrlP54846 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
NrlP54846 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.53□□□□□ -0.56
NrlP54846 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
NrlP54846 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
NrlP54846 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NrlP54846 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
NrlP54846 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
NrlP54846 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
NrlP54846 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
NrlP54846 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
NrlP54846 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
NrlP54846 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
NrlP54846 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
NrlP54846 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
NrlP54846 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.52□□□□□ -0.57
NrlP54846 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
NrlP54846 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
NrlP54846 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
NrlP54846 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
NrlP54846 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NrlP54846 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC11.52□□□□□ -0.57
NrlP54846 Gm12028-201ENSMUST00000118065 436 ntBASIC11.52□□□□□ -0.57
NrlP54846 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.52□□□□□ -0.57
NrlP54846 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
NrlP54846 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NrlP54846 Gm24078-201ENSMUST00000158184 103 ntBASIC11.52□□□□□ -0.57
NrlP54846 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NrlP54846 Gm5808-201ENSMUST00000178090 357 ntBASIC11.52□□□□□ -0.57
NrlP54846 Gm42511-201ENSMUST00000196160 234 ntBASIC11.52□□□□□ -0.57
NrlP54846 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
NrlP54846 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NrlP54846 CT030195.2-201ENSMUST00000226074 1286 ntBASIC11.52□□□□□ -0.57
NrlP54846 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NrlP54846 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NrlP54846 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
NrlP54846 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NrlP54846 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms