Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 Fam216b-202ENSMUST00000118785 1447 ntTSL 5 BASIC11.11□□□□□ -0.63
Sox1P53783 Gm6713-201ENSMUST00000216137 1446 ntBASIC11.11□□□□□ -0.63
Sox1P53783 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sox1P53783 A1cf-204ENSMUST00000224564 1432 ntBASIC11.11□□□□□ -0.63
Sox1P53783 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.11□□□□□ -0.63
Sox1P53783 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 Mir675-201ENSMUST00000102320 84 ntBASIC11.11□□□□□ -0.63
Sox1P53783 Gm12481-201ENSMUST00000102482 297 ntBASIC11.11□□□□□ -0.63
Sox1P53783 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Sox1P53783 Gm14201-201ENSMUST00000117627 289 ntBASIC11.11□□□□□ -0.63
Sox1P53783 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC11.11□□□□□ -0.63
Sox1P53783 Gm25804-201ENSMUST00000122785 188 ntBASIC11.11□□□□□ -0.63
Sox1P53783 Katnal2-203ENSMUST00000123650 638 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 Gm22994-201ENSMUST00000175422 82 ntBASIC11.11□□□□□ -0.63
Sox1P53783 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 Calb2-202ENSMUST00000212297 1080 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC11.11□□□□□ -0.63
Sox1P53783 Cd24a-202ENSMUST00000214476 743 ntAPPRIS ALT2 TSL 3 BASIC11.11□□□□□ -0.63
Sox1P53783 Gm8170-201ENSMUST00000218581 945 ntBASIC11.11□□□□□ -0.63
Sox1P53783 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.11□□□□□ -0.63
Sox1P53783 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.11□□□□□ -0.63
Sox1P53783 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sox1P53783 Gm19027-201ENSMUST00000187291 1355 ntBASIC11.11□□□□□ -0.63
Sox1P53783 Apool-201ENSMUST00000026599 1359 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 Serpina1b-201ENSMUST00000095450 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.1□□□□□ -0.63
Sox1P53783 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox1P53783 Gm38034-201ENSMUST00000193915 2069 ntBASIC11.1□□□□□ -0.63
Sox1P53783 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox1P53783 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox1P53783 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox1P53783 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.1□□□□□ -0.63
Sox1P53783 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox1P53783 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox1P53783 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox1P53783 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox1P53783 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sox1P53783 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sox1P53783 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox1P53783 Coa4-202ENSMUST00000120454 742 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox1P53783 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC11.1□□□□□ -0.63
Sox1P53783 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox1P53783 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Sox1P53783 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC11.1□□□□□ -0.63
Sox1P53783 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox1P53783 Gm28806-201ENSMUST00000191134 528 ntTSL 5 BASIC11.1□□□□□ -0.63
Sox1P53783 Gm37622-201ENSMUST00000192162 285 ntTSL 5 BASIC11.1□□□□□ -0.63
Sox1P53783 Gm38188-201ENSMUST00000192879 856 ntBASIC11.1□□□□□ -0.63
Sox1P53783 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC11.1□□□□□ -0.63
Sox1P53783 Gm30652-201ENSMUST00000199103 430 ntBASIC11.1□□□□□ -0.63
Sox1P53783 Gm42803-201ENSMUST00000201051 451 ntBASIC11.1□□□□□ -0.63
Sox1P53783 Gm43761-201ENSMUST00000202132 991 ntBASIC11.1□□□□□ -0.63
Sox1P53783 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox1P53783 AC153948.2-201ENSMUST00000218112 505 ntBASIC11.1□□□□□ -0.63
Sox1P53783 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC11.1□□□□□ -0.63
Sox1P53783 AC122356.2-201ENSMUST00000226962 820 ntBASIC11.1□□□□□ -0.63
Sox1P53783 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox1P53783 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC11.1□□□□□ -0.63
Sox1P53783 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Sox1P53783 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox1P53783 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox1P53783 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Sox1P53783 Pla2g2a-201ENSMUST00000077582 784 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sox1P53783 Gm26226-201ENSMUST00000082509 116 ntBASIC11.1□□□□□ -0.63
Sox1P53783 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox1P53783 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Sox1P53783 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Sox1P53783 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.1□□□□□ -0.63
Sox1P53783 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sox1P53783 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox1P53783 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox1P53783 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox1P53783 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox1P53783 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox1P53783 Gm5174-201ENSMUST00000171131 1423 ntBASIC11.09□□□□□ -0.63
Sox1P53783 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Sox1P53783 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Sox1P53783 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.09□□□□□ -0.63
Sox1P53783 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.09□□□□□ -0.63
Sox1P53783 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms