Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 AC109214.1-201ENSMUST00000219520 1372 ntBASIC9.46□□□□□ -0.9
TgfaP48030 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
TgfaP48030 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 Gm13608-201ENSMUST00000121807 1406 ntBASIC9.46□□□□□ -0.9
TgfaP48030 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC9.46□□□□□ -0.9
TgfaP48030 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
TgfaP48030 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Gm37058-201ENSMUST00000193393 1644 ntBASIC9.45□□□□□ -0.9
TgfaP48030 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
TgfaP48030 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Gm43463-201ENSMUST00000195967 1803 ntBASIC9.45□□□□□ -0.9
TgfaP48030 Map2-206ENSMUST00000114017 4981 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
TgfaP48030 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC9.45□□□□□ -0.9
TgfaP48030 Gm22388-201ENSMUST00000158194 248 ntBASIC9.45□□□□□ -0.9
TgfaP48030 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
TgfaP48030 Gm4775-201ENSMUST00000169588 402 ntBASIC9.45□□□□□ -0.9
TgfaP48030 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Gm25591-201ENSMUST00000177317 94 ntBASIC9.45□□□□□ -0.9
TgfaP48030 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
TgfaP48030 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
TgfaP48030 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
TgfaP48030 Gm6216-201ENSMUST00000182390 687 ntBASIC9.45□□□□□ -0.9
TgfaP48030 Kif4-ps-202ENSMUST00000185083 652 ntBASIC9.45□□□□□ -0.9
TgfaP48030 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC9.45□□□□□ -0.9
TgfaP48030 Gm43097-201ENSMUST00000196867 151 ntBASIC9.45□□□□□ -0.9
TgfaP48030 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC9.45□□□□□ -0.9
TgfaP48030 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC9.45□□□□□ -0.9
TgfaP48030 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC9.45□□□□□ -0.9
TgfaP48030 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
TgfaP48030 Gm4778-201ENSMUST00000098878 1098 ntBASIC9.45□□□□□ -0.9
TgfaP48030 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC9.45□□□□□ -0.9
TgfaP48030 Gm42815-201ENSMUST00000198787 1470 ntBASIC9.45□□□□□ -0.9
TgfaP48030 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
TgfaP48030 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC9.45□□□□□ -0.9
TgfaP48030 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC9.45□□□□□ -0.9
TgfaP48030 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TgfaP48030 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
TgfaP48030 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
TgfaP48030 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC9.44□□□□□ -0.9
TgfaP48030 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
TgfaP48030 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
TgfaP48030 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Mbtd1-206ENSMUST00000107854 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
TgfaP48030 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC9.44□□□□□ -0.9
TgfaP48030 Gm14176-201ENSMUST00000121302 477 ntBASIC9.44□□□□□ -0.9
TgfaP48030 Gm14829-201ENSMUST00000121499 1138 ntBASIC9.44□□□□□ -0.9
TgfaP48030 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC9.44□□□□□ -0.9
TgfaP48030 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC9.44□□□□□ -0.9
TgfaP48030 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Gm42732-201ENSMUST00000202887 1197 ntBASIC9.44□□□□□ -0.9
TgfaP48030 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TgfaP48030 Gm5738-201ENSMUST00000206016 779 ntBASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms