Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cdx2P43241 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 AC154197.1-201ENSMUST00000225136 1382 ntBASIC10.29□□□□□ -0.76
Cdx2P43241 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.29□□□□□ -0.76
Cdx2P43241 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.29□□□□□ -0.76
Cdx2P43241 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cdx2P43241 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Cdx2P43241 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Cdx2P43241 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Gm12470-201ENSMUST00000117239 1049 ntBASIC10.29□□□□□ -0.76
Cdx2P43241 Gm12397-201ENSMUST00000117674 615 ntBASIC10.29□□□□□ -0.76
Cdx2P43241 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Gm14997-201ENSMUST00000119232 636 ntBASIC10.29□□□□□ -0.76
Cdx2P43241 Gm14231-201ENSMUST00000120090 592 ntBASIC10.29□□□□□ -0.76
Cdx2P43241 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC10.29□□□□□ -0.76
Cdx2P43241 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.29□□□□□ -0.76
Cdx2P43241 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC10.29□□□□□ -0.76
Cdx2P43241 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
Cdx2P43241 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Gm22876-201ENSMUST00000175450 298 ntBASIC10.29□□□□□ -0.76
Cdx2P43241 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC10.29□□□□□ -0.76
Cdx2P43241 Gm37944-201ENSMUST00000194233 414 ntBASIC10.29□□□□□ -0.76
Cdx2P43241 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC10.29□□□□□ -0.76
Cdx2P43241 Gm43106-201ENSMUST00000199485 637 ntBASIC10.29□□□□□ -0.76
Cdx2P43241 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC10.29□□□□□ -0.76
Cdx2P43241 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.29□□□□□ -0.76
Cdx2P43241 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Gm8615-201ENSMUST00000025307 771 ntBASIC10.29□□□□□ -0.76
Cdx2P43241 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Cdx2P43241 Gm8420-201ENSMUST00000097103 598 ntBASIC10.29□□□□□ -0.76
Cdx2P43241 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cdx2P43241 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.29□□□□□ -0.76
Cdx2P43241 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC10.29□□□□□ -0.76
Cdx2P43241 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC10.29□□□□□ -0.76
Cdx2P43241 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.29□□□□□ -0.76
Cdx2P43241 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Cdx2P43241 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cdx2P43241 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cdx2P43241 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cdx2P43241 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cdx2P43241 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cdx2P43241 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Cdx2P43241 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.28□□□□□ -0.76
Cdx2P43241 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cdx2P43241 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.28□□□□□ -0.76
Cdx2P43241 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cdx2P43241 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC10.28□□□□□ -0.76
Cdx2P43241 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Cdx2P43241 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cdx2P43241 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cdx2P43241 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cdx2P43241 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cdx2P43241 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cdx2P43241 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cdx2P43241 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC10.28□□□□□ -0.76
Cdx2P43241 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC10.28□□□□□ -0.76
Cdx2P43241 Gm14699-201ENSMUST00000122340 228 ntBASIC10.28□□□□□ -0.76
Cdx2P43241 Gm24074-201ENSMUST00000158178 260 ntBASIC10.28□□□□□ -0.76
Cdx2P43241 Gm4775-201ENSMUST00000169588 402 ntBASIC10.28□□□□□ -0.76
Cdx2P43241 Gm5873-201ENSMUST00000177157 1066 ntBASIC10.28□□□□□ -0.76
Cdx2P43241 Gm6216-201ENSMUST00000182390 687 ntBASIC10.28□□□□□ -0.76
Cdx2P43241 Gm17799-201ENSMUST00000183270 667 ntBASIC10.28□□□□□ -0.76
Cdx2P43241 Gm8707-201ENSMUST00000183325 980 ntBASIC10.28□□□□□ -0.76
Cdx2P43241 Gm8525-201ENSMUST00000189674 861 ntBASIC10.28□□□□□ -0.76
Cdx2P43241 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Cdx2P43241 Gm38313-201ENSMUST00000191953 1266 ntBASIC10.28□□□□□ -0.76
Cdx2P43241 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC10.28□□□□□ -0.76
Cdx2P43241 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC10.28□□□□□ -0.76
Cdx2P43241 Gm18256-201ENSMUST00000209087 907 ntBASIC10.28□□□□□ -0.76
Cdx2P43241 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC10.28□□□□□ -0.76
Cdx2P43241 Gm3791-201ENSMUST00000220790 768 ntBASIC10.28□□□□□ -0.76
Cdx2P43241 AC154433.1-201ENSMUST00000224401 1183 ntBASIC10.28□□□□□ -0.76
Cdx2P43241 AC163638.2-201ENSMUST00000224920 827 ntBASIC10.28□□□□□ -0.76
Cdx2P43241 AC161172.1-201ENSMUST00000227801 486 ntBASIC10.28□□□□□ -0.76
Cdx2P43241 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms