Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl12P40224 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl12P40224 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl12P40224 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl12P40224 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl12P40224 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl12P40224 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl12P40224 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cxcl12P40224 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Cxcl12P40224 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl12P40224 Ubap2l-203ENSMUST00000090908 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl12P40224 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl12P40224 Gm16480-201ENSMUST00000120439 832 ntBASIC11.12□□□□□ -0.63
Cxcl12P40224 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC11.12□□□□□ -0.63
Cxcl12P40224 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC11.12□□□□□ -0.63
Cxcl12P40224 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.12□□□□□ -0.63
Cxcl12P40224 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl12P40224 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC11.12□□□□□ -0.63
Cxcl12P40224 Gm5801-201ENSMUST00000182247 780 ntBASIC11.12□□□□□ -0.63
Cxcl12P40224 Gm27675-201ENSMUST00000184527 94 ntBASIC11.12□□□□□ -0.63
Cxcl12P40224 Gm28916-201ENSMUST00000186988 699 ntBASIC11.12□□□□□ -0.63
Cxcl12P40224 Gm4866-201ENSMUST00000197408 589 ntBASIC11.12□□□□□ -0.63
Cxcl12P40224 Gm42908-201ENSMUST00000197508 870 ntBASIC11.12□□□□□ -0.63
Cxcl12P40224 Gm9515-201ENSMUST00000200276 647 ntBASIC11.12□□□□□ -0.63
Cxcl12P40224 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC11.12□□□□□ -0.63
Cxcl12P40224 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Cxcl12P40224 Gm18621-201ENSMUST00000222677 679 ntBASIC11.12□□□□□ -0.63
Cxcl12P40224 AC127583.1-201ENSMUST00000224351 540 ntBASIC11.12□□□□□ -0.63
Cxcl12P40224 AC102327.1-201ENSMUST00000226389 742 ntBASIC11.12□□□□□ -0.63
Cxcl12P40224 AC164883.7-201ENSMUST00000228534 851 ntBASIC11.12□□□□□ -0.63
Cxcl12P40224 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC11.12□□□□□ -0.63
Cxcl12P40224 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl12P40224 Gm38246-201ENSMUST00000194318 1511 ntBASIC11.12□□□□□ -0.63
Cxcl12P40224 Gm44664-201ENSMUST00000206841 1786 ntBASIC11.12□□□□□ -0.63
Cxcl12P40224 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Cxcl12P40224 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cxcl12P40224 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl12P40224 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl12P40224 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl12P40224 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC11.12□□□□□ -0.63
Cxcl12P40224 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl12P40224 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl12P40224 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 Gm9864-201ENSMUST00000090043 1656 ntBASIC11.11□□□□□ -0.63
Cxcl12P40224 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 Gm38227-201ENSMUST00000193036 1602 ntBASIC11.11□□□□□ -0.63
Cxcl12P40224 Mir291b-201ENSMUST00000104838 79 ntBASIC11.11□□□□□ -0.63
Cxcl12P40224 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.11□□□□□ -0.63
Cxcl12P40224 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cxcl12P40224 Gm17147-201ENSMUST00000164176 432 ntBASIC11.11□□□□□ -0.63
Cxcl12P40224 Mir3100-201ENSMUST00000174918 65 ntBASIC11.11□□□□□ -0.63
Cxcl12P40224 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Cxcl12P40224 Gm23521-201ENSMUST00000177845 110 ntBASIC11.11□□□□□ -0.63
Cxcl12P40224 Gm22616-201ENSMUST00000179783 100 ntBASIC11.11□□□□□ -0.63
Cxcl12P40224 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 Gm34248-201ENSMUST00000200027 474 ntBASIC11.11□□□□□ -0.63
Cxcl12P40224 Gm18466-201ENSMUST00000209147 499 ntBASIC11.11□□□□□ -0.63
Cxcl12P40224 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Cxcl12P40224 Gm11437-201ENSMUST00000050771 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.11□□□□□ -0.63
Cxcl12P40224 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC11.11□□□□□ -0.63
Cxcl12P40224 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.11□□□□□ -0.63
Cxcl12P40224 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC11.11□□□□□ -0.63
Cxcl12P40224 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.11□□□□□ -0.63
Cxcl12P40224 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.11□□□□□ -0.63
Cxcl12P40224 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl12P40224 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cxcl12P40224 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Cxcl12P40224 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl12P40224 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl12P40224 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.1□□□□□ -0.63
Cxcl12P40224 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl12P40224 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl12P40224 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl12P40224 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl12P40224 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cxcl12P40224 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl12P40224 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms