Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Gm12097-201ENSMUST00000121523 1414 ntBASIC12.52□□□□□ -0.41
Pde6aP27664 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pde6aP27664 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6aP27664 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.52□□□□□ -0.41
Pde6aP27664 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Pde6aP27664 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6aP27664 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6aP27664 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6aP27664 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6aP27664 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6aP27664 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6aP27664 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6aP27664 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6aP27664 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6aP27664 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6aP27664 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Pde6aP27664 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6aP27664 Gm12745-201ENSMUST00000121767 214 ntBASIC12.51□□□□□ -0.41
Pde6aP27664 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6aP27664 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC12.51□□□□□ -0.41
Pde6aP27664 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6aP27664 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6aP27664 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pde6aP27664 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pde6aP27664 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Pde6aP27664 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC12.51□□□□□ -0.41
Pde6aP27664 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pde6aP27664 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pde6aP27664 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Pde6aP27664 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC12.51□□□□□ -0.41
Pde6aP27664 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6aP27664 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Pde6aP27664 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6aP27664 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6aP27664 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC12.51□□□□□ -0.41
Pde6aP27664 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6aP27664 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6aP27664 Gm29101-201ENSMUST00000188329 1471 ntBASIC12.51□□□□□ -0.41
Pde6aP27664 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6aP27664 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6aP27664 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6aP27664 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6aP27664 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6aP27664 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6aP27664 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Pde6aP27664 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Pde6aP27664 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6aP27664 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6aP27664 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6aP27664 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6aP27664 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6aP27664 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6aP27664 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6aP27664 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6aP27664 Gm11411-201ENSMUST00000117951 719 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 Gm14234-201ENSMUST00000119539 845 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 Gm12950-201ENSMUST00000121683 417 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6aP27664 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.5□□□□□ -0.41
Pde6aP27664 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC12.5□□□□□ -0.41
Pde6aP27664 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Pde6aP27664 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6aP27664 Gm23647-201ENSMUST00000175042 109 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 Rn5s-201ENSMUST00000177555 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s108-201ENSMUST00000177575 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s121-201ENSMUST00000177589 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s146-201ENSMUST00000177889 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 Gm22109-201ENSMUST00000177995 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 Gm22291-201ENSMUST00000178027 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s141-201ENSMUST00000178066 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 Gm23284-201ENSMUST00000178069 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s100-201ENSMUST00000178106 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s111-201ENSMUST00000178203 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s105-201ENSMUST00000178499 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s149-201ENSMUST00000178520 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s103-201ENSMUST00000178755 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s123-201ENSMUST00000178804 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s142-201ENSMUST00000178820 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s144-201ENSMUST00000178859 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s139-201ENSMUST00000178975 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s134-201ENSMUST00000178983 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s136-201ENSMUST00000179080 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 Gm25018-201ENSMUST00000179081 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s104-201ENSMUST00000179107 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s113-201ENSMUST00000179143 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s133-201ENSMUST00000179275 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s117-201ENSMUST00000179431 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 Gm25212-201ENSMUST00000179432 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s138-201ENSMUST00000179476 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s122-201ENSMUST00000179500 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s143-201ENSMUST00000179542 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s107-201ENSMUST00000179704 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 Gm26391-201ENSMUST00000179843 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s110-201ENSMUST00000179995 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s128-201ENSMUST00000180096 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 n-R5s124-201ENSMUST00000180334 119 ntBASIC12.5□□□□□ -0.41
Pde6aP27664 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6aP27664 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6aP27664 Gm29155-201ENSMUST00000185910 269 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms