Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm27441-201ENSMUST00000185000 105 ntBASIC13.94□□□□□ -0.18
Hoxc9P09633 Gm28391-201ENSMUST00000185202 379 ntBASIC13.94□□□□□ -0.18
Hoxc9P09633 Gm29528-201ENSMUST00000186699 379 ntBASIC13.94□□□□□ -0.18
Hoxc9P09633 Gm29526-201ENSMUST00000187217 379 ntBASIC13.94□□□□□ -0.18
Hoxc9P09633 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC13.94□□□□□ -0.18
Hoxc9P09633 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC13.94□□□□□ -0.18
Hoxc9P09633 Gm44304-201ENSMUST00000200509 145 ntBASIC13.94□□□□□ -0.18
Hoxc9P09633 Gm19798-201ENSMUST00000201502 457 ntBASIC13.94□□□□□ -0.18
Hoxc9P09633 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC13.94□□□□□ -0.18
Hoxc9P09633 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC13.94□□□□□ -0.18
Hoxc9P09633 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC13.94□□□□□ -0.18
Hoxc9P09633 AC107711.3-201ENSMUST00000228939 1035 ntBASIC13.94□□□□□ -0.18
Hoxc9P09633 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Hoxc9P09633 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc9P09633 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc9P09633 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc9P09633 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc9P09633 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc9P09633 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
Hoxc9P09633 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc9P09633 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc9P09633 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc9P09633 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc9P09633 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc9P09633 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc9P09633 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc9P09633 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc9P09633 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc9P09633 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc9P09633 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc9P09633 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Hoxc9P09633 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc9P09633 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC13.93□□□□□ -0.18
Hoxc9P09633 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC13.93□□□□□ -0.18
Hoxc9P09633 Gm6276-201ENSMUST00000120159 579 ntBASIC13.93□□□□□ -0.18
Hoxc9P09633 Gm15793-201ENSMUST00000121857 495 ntBASIC13.93□□□□□ -0.18
Hoxc9P09633 Gm6216-201ENSMUST00000182390 687 ntBASIC13.93□□□□□ -0.18
Hoxc9P09633 Gm28179-201ENSMUST00000188365 613 ntBASIC13.93□□□□□ -0.18
Hoxc9P09633 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Hoxc9P09633 Gm37141-201ENSMUST00000191938 422 ntBASIC13.93□□□□□ -0.18
Hoxc9P09633 Gm29808-201ENSMUST00000194419 468 ntBASIC13.93□□□□□ -0.18
Hoxc9P09633 Gm43117-201ENSMUST00000198531 379 ntBASIC13.93□□□□□ -0.18
Hoxc9P09633 Gm42687-201ENSMUST00000199075 164 ntBASIC13.93□□□□□ -0.18
Hoxc9P09633 Gm19566-201ENSMUST00000199576 610 ntBASIC13.93□□□□□ -0.18
Hoxc9P09633 AC165260.2-201ENSMUST00000225371 395 ntBASIC13.93□□□□□ -0.18
Hoxc9P09633 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Hoxc9P09633 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc9P09633 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc9P09633 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Hoxc9P09633 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc9P09633 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Hoxc9P09633 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC13.93□□□□□ -0.18
Hoxc9P09633 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc9P09633 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc9P09633 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Hoxc9P09633 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc9P09633 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc9P09633 Gm44975-201ENSMUST00000207435 1390 ntBASIC13.93□□□□□ -0.18
Hoxc9P09633 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.93□□□□□ -0.18
Hoxc9P09633 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc9P09633 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc9P09633 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Hoxc9P09633 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc9P09633 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Hoxc9P09633 Gm43052-201ENSMUST00000201451 1628 ntBASIC13.93□□□□□ -0.18
Hoxc9P09633 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc9P09633 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc9P09633 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Hoxc9P09633 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc9P09633 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc9P09633 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc9P09633 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc9P09633 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc9P09633 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc9P09633 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc9P09633 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc9P09633 Gm22582-201ENSMUST00000102283 94 ntBASIC13.92□□□□□ -0.18
Hoxc9P09633 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Hoxc9P09633 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Hoxc9P09633 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC13.92□□□□□ -0.18
Hoxc9P09633 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc9P09633 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc9P09633 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC13.92□□□□□ -0.18
Hoxc9P09633 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC13.92□□□□□ -0.18
Hoxc9P09633 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC13.92□□□□□ -0.18
Hoxc9P09633 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC13.92□□□□□ -0.18
Hoxc9P09633 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC13.92□□□□□ -0.18
Hoxc9P09633 Gm45090-201ENSMUST00000208775 1148 ntBASIC13.92□□□□□ -0.18
Hoxc9P09633 Gm19090-201ENSMUST00000218187 774 ntBASIC13.92□□□□□ -0.18
Hoxc9P09633 AC149294.3-201ENSMUST00000226888 732 ntBASIC13.92□□□□□ -0.18
Hoxc9P09633 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc9P09633 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc9P09633 Gm10617-201ENSMUST00000098368 1172 ntBASIC13.92□□□□□ -0.18
Hoxc9P09633 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc9P09633 Gm32914-201ENSMUST00000203815 2228 ntBASIC13.92□□□□□ -0.18
Hoxc9P09633 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc9P09633 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC13.92□□□□□ -0.18
Hoxc9P09633 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc9P09633 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Hoxc9P09633 Pck2-205ENSMUST00000226352 2784 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms