Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.05□□□□□ -0.64
PdgfrbP05622 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.05□□□□□ -0.64
PdgfrbP05622 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdgfrbP05622 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdgfrbP05622 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
PdgfrbP05622 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
PdgfrbP05622 Gm23680-201ENSMUST00000083162 164 ntBASIC11.05□□□□□ -0.64
PdgfrbP05622 Gm25125-201ENSMUST00000083340 136 ntBASIC11.05□□□□□ -0.64
PdgfrbP05622 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.05□□□□□ -0.64
PdgfrbP05622 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
PdgfrbP05622 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdgfrbP05622 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdgfrbP05622 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdgfrbP05622 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PdgfrbP05622 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.05□□□□□ -0.64
PdgfrbP05622 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PdgfrbP05622 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdgfrbP05622 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
PdgfrbP05622 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
PdgfrbP05622 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.04□□□□□ -0.64
PdgfrbP05622 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.04□□□□□ -0.64
PdgfrbP05622 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
PdgfrbP05622 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
PdgfrbP05622 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.04□□□□□ -0.64
PdgfrbP05622 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.04□□□□□ -0.64
PdgfrbP05622 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.04□□□□□ -0.64
PdgfrbP05622 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.04□□□□□ -0.64
PdgfrbP05622 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.04□□□□□ -0.64
PdgfrbP05622 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.04□□□□□ -0.64
PdgfrbP05622 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
PdgfrbP05622 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Gm22138-201ENSMUST00000158748 128 ntBASIC11.04□□□□□ -0.64
PdgfrbP05622 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.04□□□□□ -0.64
PdgfrbP05622 Gm20659-201ENSMUST00000176599 604 ntTSL 3 BASIC11.04□□□□□ -0.64
PdgfrbP05622 Gm26736-201ENSMUST00000180425 1236 ntBASIC11.04□□□□□ -0.64
PdgfrbP05622 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Gm7255-201ENSMUST00000187371 908 ntBASIC11.04□□□□□ -0.64
PdgfrbP05622 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC11.04□□□□□ -0.64
PdgfrbP05622 Gm28438-201ENSMUST00000188299 345 ntBASIC11.04□□□□□ -0.64
PdgfrbP05622 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC11.04□□□□□ -0.64
PdgfrbP05622 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC11.04□□□□□ -0.64
PdgfrbP05622 Gm3786-201ENSMUST00000202659 378 ntBASIC11.04□□□□□ -0.64
PdgfrbP05622 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.04□□□□□ -0.64
PdgfrbP05622 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.04□□□□□ -0.64
PdgfrbP05622 AC131743.3-201ENSMUST00000222099 662 ntBASIC11.04□□□□□ -0.64
PdgfrbP05622 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
PdgfrbP05622 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
PdgfrbP05622 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
PdgfrbP05622 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
PdgfrbP05622 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
PdgfrbP05622 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
PdgfrbP05622 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.04□□□□□ -0.64
PdgfrbP05622 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.04□□□□□ -0.64
PdgfrbP05622 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Gm45041-201ENSMUST00000207366 3108 ntBASIC11.04□□□□□ -0.64
PdgfrbP05622 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdgfrbP05622 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.03□□□□□ -0.64
PdgfrbP05622 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdgfrbP05622 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdgfrbP05622 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
PdgfrbP05622 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PdgfrbP05622 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
PdgfrbP05622 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.03□□□□□ -0.64
PdgfrbP05622 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdgfrbP05622 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PdgfrbP05622 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
PdgfrbP05622 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdgfrbP05622 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PdgfrbP05622 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.03□□□□□ -0.64
PdgfrbP05622 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms