Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Itgb3O54890 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Itgb3O54890 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Itgb3O54890 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Itgb3O54890 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.45□□□□□ -0.58
Itgb3O54890 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Itgb3O54890 Gm5641-201ENSMUST00000091130 1488 ntBASIC11.45□□□□□ -0.58
Itgb3O54890 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.45□□□□□ -0.58
Itgb3O54890 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.45□□□□□ -0.58
Itgb3O54890 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Itgb3O54890 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.45□□□□□ -0.58
Itgb3O54890 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Itgb3O54890 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC11.45□□□□□ -0.58
Itgb3O54890 Gm11996-201ENSMUST00000117538 915 ntBASIC11.45□□□□□ -0.58
Itgb3O54890 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Itgb3O54890 Gm13039-201ENSMUST00000118638 794 ntBASIC11.45□□□□□ -0.58
Itgb3O54890 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC11.45□□□□□ -0.58
Itgb3O54890 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC11.45□□□□□ -0.58
Itgb3O54890 Gm8451-201ENSMUST00000170338 447 ntBASIC11.45□□□□□ -0.58
Itgb3O54890 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Itgb3O54890 Gm37860-201ENSMUST00000195380 1034 ntBASIC11.45□□□□□ -0.58
Itgb3O54890 Gm18466-201ENSMUST00000209147 499 ntBASIC11.45□□□□□ -0.58
Itgb3O54890 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Itgb3O54890 AC162932.1-201ENSMUST00000219209 872 ntBASIC11.45□□□□□ -0.58
Itgb3O54890 AC132260.2-201ENSMUST00000224482 344 ntBASIC11.45□□□□□ -0.58
Itgb3O54890 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Gm5453-201ENSMUST00000080866 447 ntBASIC11.45□□□□□ -0.58
Itgb3O54890 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC11.45□□□□□ -0.58
Itgb3O54890 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Itgb3O54890 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Itgb3O54890 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Itgb3O54890 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Itgb3O54890 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Itgb3O54890 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.45□□□□□ -0.58
Itgb3O54890 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Itgb3O54890 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Itgb3O54890 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Itgb3O54890 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Itgb3O54890 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.44□□□□□ -0.58
Itgb3O54890 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Itgb3O54890 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Itgb3O54890 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Itgb3O54890 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.44□□□□□ -0.58
Itgb3O54890 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Itgb3O54890 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Itgb3O54890 Gm42851-201ENSMUST00000201325 1411 ntBASIC11.44□□□□□ -0.58
Itgb3O54890 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC11.44□□□□□ -0.58
Itgb3O54890 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Itgb3O54890 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Itgb3O54890 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.44□□□□□ -0.58
Itgb3O54890 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Itgb3O54890 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.44□□□□□ -0.58
Itgb3O54890 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.44□□□□□ -0.58
Itgb3O54890 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Itgb3O54890 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Itgb3O54890 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Itgb3O54890 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.44□□□□□ -0.58
Itgb3O54890 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Itgb3O54890 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Itgb3O54890 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Itgb3O54890 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Itgb3O54890 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC11.44□□□□□ -0.58
Itgb3O54890 Gm11475-201ENSMUST00000118482 476 ntBASIC11.44□□□□□ -0.58
Itgb3O54890 Gm14113-201ENSMUST00000121399 976 ntBASIC11.44□□□□□ -0.58
Itgb3O54890 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Itgb3O54890 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC11.44□□□□□ -0.58
Itgb3O54890 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Itgb3O54890 Gm7985-201ENSMUST00000183329 981 ntBASIC11.44□□□□□ -0.58
Itgb3O54890 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC11.44□□□□□ -0.58
Itgb3O54890 Gm5267-201ENSMUST00000191574 1045 ntBASIC11.44□□□□□ -0.58
Itgb3O54890 Ighv5-8-202ENSMUST00000191967 337 ntBASIC11.44□□□□□ -0.58
Itgb3O54890 Gm37723-201ENSMUST00000194480 565 ntBASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms