Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rtn4Q99P72 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rtn4Q99P72 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Gm44742-201ENSMUST00000207190 1412 ntBASIC14.84□□□□□ -0.03
Rtn4Q99P72 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Gm26286-201ENSMUST00000104166 134 ntBASIC14.84□□□□□ -0.03
Rtn4Q99P72 Gm11663-201ENSMUST00000117888 290 ntBASIC14.84□□□□□ -0.03
Rtn4Q99P72 Gm15421-202ENSMUST00000118224 399 ntBASIC14.84□□□□□ -0.03
Rtn4Q99P72 Gm12072-201ENSMUST00000118293 715 ntBASIC14.84□□□□□ -0.03
Rtn4Q99P72 Gm15030-201ENSMUST00000119804 484 ntBASIC14.84□□□□□ -0.03
Rtn4Q99P72 Gm14665-201ENSMUST00000122294 557 ntBASIC14.84□□□□□ -0.03
Rtn4Q99P72 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Gm5125-201ENSMUST00000148614 624 ntBASIC14.84□□□□□ -0.03
Rtn4Q99P72 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.84□□□□□ -0.03
Rtn4Q99P72 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Gm28503-201ENSMUST00000185966 147 ntBASIC14.84□□□□□ -0.03
Rtn4Q99P72 Gm18529-201ENSMUST00000193025 1257 ntBASIC14.84□□□□□ -0.03
Rtn4Q99P72 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC14.84□□□□□ -0.03
Rtn4Q99P72 Gm44988-201ENSMUST00000203835 1161 ntBASIC14.84□□□□□ -0.03
Rtn4Q99P72 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Rtn4Q99P72 D9Wsu149-201ENSMUST00000214169 594 ntBASIC14.84□□□□□ -0.03
Rtn4Q99P72 AC156952.1-201ENSMUST00000220361 793 ntBASIC14.84□□□□□ -0.03
Rtn4Q99P72 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC14.84□□□□□ -0.03
Rtn4Q99P72 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC14.84□□□□□ -0.03
Rtn4Q99P72 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.84□□□□□ -0.03
Rtn4Q99P72 AC156574.2-201ENSMUST00000228023 282 ntBASIC14.84□□□□□ -0.03
Rtn4Q99P72 AC122937.2-201ENSMUST00000228258 1051 ntBASIC14.84□□□□□ -0.03
Rtn4Q99P72 Gm7551-201ENSMUST00000089593 1074 ntBASIC14.84□□□□□ -0.03
Rtn4Q99P72 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Rtn4Q99P72 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtn4Q99P72 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.84□□□□□ -0.03
Rtn4Q99P72 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rtn4Q99P72 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rtn4Q99P72 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rtn4Q99P72 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rtn4Q99P72 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Rtn4Q99P72 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rtn4Q99P72 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Rtn4Q99P72 Gm5715-201ENSMUST00000196854 1465 ntBASIC14.83□□□□□ -0.03
Rtn4Q99P72 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC14.83□□□□□ -0.03
Rtn4Q99P72 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Rtn4Q99P72 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
Rtn4Q99P72 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Rtn4Q99P72 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Rtn4Q99P72 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rtn4Q99P72 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rtn4Q99P72 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rtn4Q99P72 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rtn4Q99P72 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rtn4Q99P72 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Rtn4Q99P72 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rtn4Q99P72 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Rtn4Q99P72 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.83□□□□□ -0.04
Rtn4Q99P72 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rtn4Q99P72 Gm436-201ENSMUST00000105747 1224 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Rtn4Q99P72 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Rtn4Q99P72 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC14.83□□□□□ -0.04
Rtn4Q99P72 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC14.83□□□□□ -0.04
Rtn4Q99P72 Gm12029-201ENSMUST00000120073 832 ntBASIC14.83□□□□□ -0.04
Rtn4Q99P72 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC14.83□□□□□ -0.04
Rtn4Q99P72 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14.83□□□□□ -0.04
Rtn4Q99P72 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC14.83□□□□□ -0.04
Rtn4Q99P72 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.83□□□□□ -0.04
Rtn4Q99P72 Gm25557-201ENSMUST00000158084 315 ntBASIC14.83□□□□□ -0.04
Rtn4Q99P72 Gm16558-201ENSMUST00000163015 532 ntBASIC14.83□□□□□ -0.04
Rtn4Q99P72 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rtn4Q99P72 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rtn4Q99P72 Mir3473c-201ENSMUST00000175262 81 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms