Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Gm45719-201ENSMUST00000207954 1662 ntBASIC11.5□□□□□ -0.57
Clp1Q99LI9 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Gm38312-201ENSMUST00000195426 1746 ntBASIC11.5□□□□□ -0.57
Clp1Q99LI9 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Snora68-201ENSMUST00000104375 131 ntBASIC11.5□□□□□ -0.57
Clp1Q99LI9 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC11.5□□□□□ -0.57
Clp1Q99LI9 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC11.5□□□□□ -0.57
Clp1Q99LI9 Gm12397-201ENSMUST00000117674 615 ntBASIC11.5□□□□□ -0.57
Clp1Q99LI9 Gm13777-201ENSMUST00000118208 345 ntBASIC11.5□□□□□ -0.57
Clp1Q99LI9 Gm13438-201ENSMUST00000120100 573 ntBASIC11.5□□□□□ -0.57
Clp1Q99LI9 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC11.5□□□□□ -0.57
Clp1Q99LI9 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Gm24074-201ENSMUST00000158178 260 ntBASIC11.5□□□□□ -0.57
Clp1Q99LI9 Gm20091-201ENSMUST00000179683 189 ntBASIC11.5□□□□□ -0.57
Clp1Q99LI9 Gm6216-201ENSMUST00000182390 687 ntBASIC11.5□□□□□ -0.57
Clp1Q99LI9 Gm6546-201ENSMUST00000192096 766 ntBASIC11.5□□□□□ -0.57
Clp1Q99LI9 Gm44908-201ENSMUST00000208610 266 ntBASIC11.5□□□□□ -0.57
Clp1Q99LI9 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Gm8796-201ENSMUST00000219122 936 ntBASIC11.5□□□□□ -0.57
Clp1Q99LI9 AC154646.1-201ENSMUST00000225011 1092 ntBASIC11.5□□□□□ -0.57
Clp1Q99LI9 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clp1Q99LI9 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.5□□□□□ -0.57
Clp1Q99LI9 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clp1Q99LI9 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Gm12345-201ENSMUST00000119288 898 ntBASIC11.49□□□□□ -0.57
Clp1Q99LI9 Gm12736-201ENSMUST00000119330 236 ntBASIC11.49□□□□□ -0.57
Clp1Q99LI9 Gm13624-201ENSMUST00000120263 462 ntBASIC11.49□□□□□ -0.57
Clp1Q99LI9 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clp1Q99LI9 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Gm7255-201ENSMUST00000187371 908 ntBASIC11.49□□□□□ -0.57
Clp1Q99LI9 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC11.49□□□□□ -0.57
Clp1Q99LI9 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC11.49□□□□□ -0.57
Clp1Q99LI9 AC134860.2-201ENSMUST00000225277 1036 ntBASIC11.49□□□□□ -0.57
Clp1Q99LI9 AC164883.7-201ENSMUST00000228534 851 ntBASIC11.49□□□□□ -0.57
Clp1Q99LI9 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Gm8968-201ENSMUST00000199133 1303 ntBASIC11.49□□□□□ -0.57
Clp1Q99LI9 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clp1Q99LI9 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC11.49□□□□□ -0.57
Clp1Q99LI9 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clp1Q99LI9 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms