Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Gm22379-201ENSMUST00000157480 131 ntBASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Mir3547-201ENSMUST00000175461 88 ntBASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Gm8684-201ENSMUST00000195078 1564 ntBASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Gm7082-201ENSMUST00000209880 969 ntBASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Gm5178-201ENSMUST00000219380 898 ntBASIC11.9□□□□□ -0.5
Trim9Q8C7M3 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.9□□□□□ -0.5
Trim9Q8C7M3 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Gm37516-201ENSMUST00000192593 1954 ntBASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
Trim9Q8C7M3 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
Trim9Q8C7M3 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trim9Q8C7M3 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim9Q8C7M3 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 AC122367.1-201ENSMUST00000221978 1709 ntBASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Mir1901-201ENSMUST00000122616 78 ntBASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Gm20392-201ENSMUST00000173047 701 ntBASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Gm18776-201ENSMUST00000188833 654 ntBASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Gm42660-201ENSMUST00000197733 947 ntBASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Gm3786-201ENSMUST00000202659 378 ntBASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Gm7319-201ENSMUST00000210047 778 ntBASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Gm9139-201ENSMUST00000218817 700 ntBASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Gm16380-201ENSMUST00000077997 478 ntBASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 AC140462.2-201ENSMUST00000225718 2433 ntBASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim9Q8C7M3 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.88□□□□□ -0.51
Trim9Q8C7M3 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Gm25063-201ENSMUST00000104666 94 ntBASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Gm6425-201ENSMUST00000136332 790 ntBASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Mir6998-201ENSMUST00000183343 64 ntBASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Gm42518-201ENSMUST00000196277 938 ntBASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Capsl-202ENSMUST00000226688 739 ntBASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Trim9Q8C7M3 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms