Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp44Q8C2S0 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC12.63□□□□□ -0.39
Usp44Q8C2S0 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp44Q8C2S0 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp44Q8C2S0 Gm26119-201ENSMUST00000175601 104 ntBASIC12.63□□□□□ -0.39
Usp44Q8C2S0 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.63□□□□□ -0.39
Usp44Q8C2S0 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.63□□□□□ -0.39
Usp44Q8C2S0 Gm6352-201ENSMUST00000203583 1134 ntBASIC12.63□□□□□ -0.39
Usp44Q8C2S0 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC12.63□□□□□ -0.39
Usp44Q8C2S0 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp44Q8C2S0 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp44Q8C2S0 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Usp44Q8C2S0 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp44Q8C2S0 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Usp44Q8C2S0 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp44Q8C2S0 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Usp44Q8C2S0 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC12.63□□□□□ -0.39
Usp44Q8C2S0 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp44Q8C2S0 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Gm42780-201ENSMUST00000197083 734 ntBASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Gm44304-201ENSMUST00000200509 145 ntBASIC12.62□□□□□ -0.39
Usp44Q8C2S0 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp44Q8C2S0 Gm37242-201ENSMUST00000191873 2085 ntBASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Gm12795-201ENSMUST00000117594 539 ntBASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Gm14234-201ENSMUST00000119539 845 ntBASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Gm11980-201ENSMUST00000121445 986 ntBASIC12.61□□□□□ -0.39
Usp44Q8C2S0 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Gm26208-201ENSMUST00000158677 124 ntBASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Gm5543-201ENSMUST00000193329 1091 ntBASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Igkv2-116-201ENSMUST00000199327 362 ntBASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Gm5881-201ENSMUST00000204737 367 ntBASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Gm18059-201ENSMUST00000208073 580 ntBASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp44Q8C2S0 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp44Q8C2S0 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp44Q8C2S0 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp44Q8C2S0 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms