Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Gm45124-201ENSMUST00000206723 2755 ntBASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Mir671-201ENSMUST00000102432 98 ntBASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Gm12461-201ENSMUST00000120231 1239 ntBASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Mir432-201ENSMUST00000157230 75 ntBASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Mir8111-201ENSMUST00000184463 137 ntBASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Gm28671-201ENSMUST00000187036 692 ntBASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Olfr692-202ENSMUST00000217827 1126 ntBASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 n-R5s71-201ENSMUST00000093668 119 ntBASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Gm5159-201ENSMUST00000212733 1652 ntBASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sh3rf2Q8BZT2 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Gm13094-201ENSMUST00000117930 409 ntBASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Gm6425-201ENSMUST00000136332 790 ntBASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Gm13827-201ENSMUST00000148801 372 ntBASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Gm25872-201ENSMUST00000177784 100 ntBASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Trav11n-201ENSMUST00000200113 343 ntBASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 AC156790.2-201ENSMUST00000227115 568 ntBASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Gm38344-201ENSMUST00000195306 1353 ntBASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sh3rf2Q8BZT2 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms