Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Usp40Q8BWR4 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Usp40Q8BWR4 AC105408.1-201ENSMUST00000227771 802 ntBASIC14.8□□□□□ -0.04
Usp40Q8BWR4 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Usp40Q8BWR4 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Usp40Q8BWR4 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Usp40Q8BWR4 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Usp40Q8BWR4 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Usp40Q8BWR4 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Usp40Q8BWR4 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Usp40Q8BWR4 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Usp40Q8BWR4 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Usp40Q8BWR4 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Usp40Q8BWR4 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Usp40Q8BWR4 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Usp40Q8BWR4 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Usp40Q8BWR4 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.8□□□□□ -0.04
Usp40Q8BWR4 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Usp40Q8BWR4 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Usp40Q8BWR4 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Usp40Q8BWR4 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Usp40Q8BWR4 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Usp40Q8BWR4 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Usp40Q8BWR4 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Usp40Q8BWR4 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC14.79□□□□□ -0.04
Usp40Q8BWR4 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Usp40Q8BWR4 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC14.79□□□□□ -0.04
Usp40Q8BWR4 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp40Q8BWR4 Uba52-ps-201ENSMUST00000183770 379 ntBASIC14.79□□□□□ -0.04
Usp40Q8BWR4 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Usp40Q8BWR4 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Usp40Q8BWR4 Gm43375-201ENSMUST00000196705 2480 ntBASIC14.79□□□□□ -0.04
Usp40Q8BWR4 Gm43752-201ENSMUST00000198475 697 ntBASIC14.79□□□□□ -0.04
Usp40Q8BWR4 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC14.79□□□□□ -0.04
Usp40Q8BWR4 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Usp40Q8BWR4 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp40Q8BWR4 Gm4930-201ENSMUST00000219926 1087 ntBASIC14.79□□□□□ -0.04
Usp40Q8BWR4 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Usp40Q8BWR4 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp40Q8BWR4 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Usp40Q8BWR4 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Usp40Q8BWR4 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Usp40Q8BWR4 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp40Q8BWR4 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp40Q8BWR4 Gm45675-201ENSMUST00000211202 3429 ntBASIC14.79□□□□□ -0.04
Usp40Q8BWR4 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC14.79□□□□□ -0.04
Usp40Q8BWR4 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp40Q8BWR4 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp40Q8BWR4 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usp40Q8BWR4 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Usp40Q8BWR4 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Gm6783-201ENSMUST00000120916 1437 ntBASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Gm29245-201ENSMUST00000187332 1416 ntBASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Gm8482-201ENSMUST00000117972 471 ntBASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Gm13841-201ENSMUST00000118829 483 ntBASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Gm11449-201ENSMUST00000119175 476 ntBASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Gm6238-201ENSMUST00000120999 465 ntBASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Gm8210-201ENSMUST00000178557 483 ntBASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Gm15454-201ENSMUST00000179718 483 ntBASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Gm17796-201ENSMUST00000189015 1213 ntBASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Gm8918-201ENSMUST00000190587 1087 ntBASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Gm9515-201ENSMUST00000200276 647 ntBASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Gm6344-201ENSMUST00000075962 483 ntBASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Gm37697-201ENSMUST00000195680 1844 ntBASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usp40Q8BWR4 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC14.77□□□□□ -0.04
Usp40Q8BWR4 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usp40Q8BWR4 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Usp40Q8BWR4 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usp40Q8BWR4 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usp40Q8BWR4 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC14.77□□□□□ -0.04
Usp40Q8BWR4 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Usp40Q8BWR4 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usp40Q8BWR4 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Usp40Q8BWR4 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Usp40Q8BWR4 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usp40Q8BWR4 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usp40Q8BWR4 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Usp40Q8BWR4 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC14.77□□□□□ -0.05
Usp40Q8BWR4 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC14.77□□□□□ -0.05
Usp40Q8BWR4 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Usp40Q8BWR4 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms