Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Gm13120-201ENSMUST00000117343 1446 ntBASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Gm13104-201ENSMUST00000119651 1446 ntBASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Gm6783-201ENSMUST00000120916 1437 ntBASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Gm6713-201ENSMUST00000216137 1446 ntBASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Gm18466-201ENSMUST00000209147 499 ntBASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ddx55Q6ZPL9 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Gm45165-201ENSMUST00000207763 1631 ntBASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 AC154640.1-203ENSMUST00000228316 1618 ntBASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Gm15793-201ENSMUST00000121857 495 ntBASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Gm40332-201ENSMUST00000199847 938 ntBASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Gm19798-201ENSMUST00000201502 457 ntBASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Gm25125-201ENSMUST00000083340 136 ntBASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ddx55Q6ZPL9 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 A1cf-204ENSMUST00000224564 1432 ntBASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx55Q6ZPL9 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms