Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Gm37697-201ENSMUST00000195680 1844 ntBASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Gm16030-201ENSMUST00000159098 603 ntBASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Gm19013-201ENSMUST00000183895 1222 ntBASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Mir6958-201ENSMUST00000184207 73 ntBASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Gm19014-201ENSMUST00000184828 1189 ntBASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Gm45120-201ENSMUST00000208880 408 ntBASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Gm7082-201ENSMUST00000209880 969 ntBASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Gm16380-201ENSMUST00000077997 478 ntBASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.63□□□□□ -0.39
Smarcc2Q6PDG5 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Gm14219-201ENSMUST00000120414 288 ntBASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Gm5244-201ENSMUST00000164001 339 ntBASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Gm28833-201ENSMUST00000189671 559 ntBASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Gm7047-201ENSMUST00000196224 1063 ntBASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Gm31941-201ENSMUST00000209689 350 ntBASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Gm18514-201ENSMUST00000218980 436 ntBASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Gm18968-201ENSMUST00000221319 862 ntBASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Gm7405-201ENSMUST00000121476 1337 ntBASIC12.62□□□□□ -0.39
Smarcc2Q6PDG5 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms