Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Gm13117-201ENSMUST00000120894 691 ntBASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.5□□□□□ -0.57
Syne3Q4FZC9 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Gm30671-201ENSMUST00000214898 318 ntBASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Gm19009-201ENSMUST00000223072 823 ntBASIC11.5□□□□□ -0.57
Syne3Q4FZC9 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Syne3Q4FZC9 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Gm14592-201ENSMUST00000117201 560 ntBASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Gm13284-201ENSMUST00000121020 547 ntBASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Gm12208-201ENSMUST00000122004 163 ntBASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Gm28388-201ENSMUST00000186262 437 ntBASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Gm44158-201ENSMUST00000203881 505 ntBASIC11.49□□□□□ -0.57
Syne3Q4FZC9 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Syne3Q4FZC9 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms