Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm33466-201ENSMUST00000199819 1689 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b2Q3UJB0 Gm9864-201ENSMUST00000090043 1656 ntBASIC14.02□□□□□ -0.16
Sf3b2Q3UJB0 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC14.02□□□□□ -0.16
Sf3b2Q3UJB0 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Mir8104-201ENSMUST00000185165 101 ntBASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Gm44460-201ENSMUST00000196179 129 ntBASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Olfr139-203ENSMUST00000206280 1059 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Gm5697-201ENSMUST00000122295 2482 ntBASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Gm42833-201ENSMUST00000196019 2124 ntBASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b2Q3UJB0 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 AC132833.1-202ENSMUST00000228875 1690 ntBASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Gm38111-201ENSMUST00000194817 2741 ntBASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Gm44086-201ENSMUST00000203251 2349 ntBASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Serpina1b-201ENSMUST00000095450 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Mir704-201ENSMUST00000102106 77 ntBASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Mipep-ps-201ENSMUST00000177439 291 ntBASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Gm21963-201ENSMUST00000179519 330 ntBASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Gm9578-201ENSMUST00000182354 753 ntBASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Gm28746-201ENSMUST00000187453 380 ntBASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Gm28179-201ENSMUST00000188365 613 ntBASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Gm40414-201ENSMUST00000197608 481 ntBASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Gm44716-201ENSMUST00000209007 710 ntBASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 CT025642.1-201ENSMUST00000224734 1219 ntBASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 AC114585.2-201ENSMUST00000227693 486 ntBASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Elobl-202ENSMUST00000082339 300 ntBASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC14.01□□□□□ -0.17
Sf3b2Q3UJB0 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b2Q3UJB0 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b2Q3UJB0 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b2Q3UJB0 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b2Q3UJB0 Gm26616-202ENSMUST00000195676 3107 ntBASIC14□□□□□ -0.17
Sf3b2Q3UJB0 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b2Q3UJB0 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sf3b2Q3UJB0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sf3b2Q3UJB0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sf3b2Q3UJB0 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b2Q3UJB0 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b2Q3UJB0 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC14□□□□□ -0.17
Sf3b2Q3UJB0 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC14□□□□□ -0.17
Sf3b2Q3UJB0 6330418K02Rik-202ENSMUST00000125662 1267 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sf3b2Q3UJB0 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sf3b2Q3UJB0 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC14□□□□□ -0.17
Sf3b2Q3UJB0 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 102.6 ms