Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Gm5523-201ENSMUST00000180415 997 ntBASIC11.46□□□□□ -0.57
Trim43aQ3TL54 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Gm37246-201ENSMUST00000192665 835 ntBASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Gm37835-201ENSMUST00000193305 361 ntBASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Gm37981-201ENSMUST00000194280 535 ntBASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Gm45310-201ENSMUST00000210436 275 ntBASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Gm18042-201ENSMUST00000219887 790 ntBASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim43aQ3TL54 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trim43aQ3TL54 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Trim43aQ3TL54 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trim43aQ3TL54 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Trim43aQ3TL54 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim43aQ3TL54 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim43aQ3TL54 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC11.46□□□□□ -0.58
Trim43aQ3TL54 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim43aQ3TL54 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim43aQ3TL54 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trim43aQ3TL54 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.58
Trim43aQ3TL54 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.46□□□□□ -0.58
Trim43aQ3TL54 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim43aQ3TL54 Gm7357-201ENSMUST00000195361 2991 ntBASIC11.46□□□□□ -0.58
Trim43aQ3TL54 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Gm15615-201ENSMUST00000118876 198 ntBASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Gm15131-201ENSMUST00000119124 595 ntBASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Gm14395-201ENSMUST00000120494 563 ntBASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Mir1943-201ENSMUST00000158276 73 ntBASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Gm4812-201ENSMUST00000182847 993 ntBASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Gm7467-201ENSMUST00000185173 652 ntBASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Gm43852-201ENSMUST00000202098 917 ntBASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim43aQ3TL54 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Gm37567-201ENSMUST00000193241 2279 ntBASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Cdh18-207ENSMUST00000226693 2165 ntBASIC11.44□□□□□ -0.58
Trim43aQ3TL54 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Gm12419-201ENSMUST00000116649 636 ntBASIC11.44□□□□□ -0.58
Trim43aQ3TL54 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms