Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Gm6783-201ENSMUST00000120916 1437 ntBASIC12.84□□□□□ -0.35
Chrna5Q2MKA5 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chrna5Q2MKA5 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Chrna5Q2MKA5 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.84□□□□□ -0.35
Chrna5Q2MKA5 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chrna5Q2MKA5 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.84□□□□□ -0.35
Chrna5Q2MKA5 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chrna5Q2MKA5 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Chrna5Q2MKA5 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Chrna5Q2MKA5 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Chrna5Q2MKA5 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.84□□□□□ -0.35
Chrna5Q2MKA5 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chrna5Q2MKA5 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chrna5Q2MKA5 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chrna5Q2MKA5 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Chrna5Q2MKA5 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chrna5Q2MKA5 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Gm15476-201ENSMUST00000118247 1191 ntBASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Gm17797-201ENSMUST00000182175 997 ntBASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Gm29487-201ENSMUST00000190146 256 ntBASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Gm45308-201ENSMUST00000210610 415 ntBASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Gm8420-201ENSMUST00000097103 598 ntBASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Gm45663-201ENSMUST00000210429 1632 ntBASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Gm7701-201ENSMUST00000163185 1479 ntBASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chrna5Q2MKA5 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Gm15793-201ENSMUST00000121857 495 ntBASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Gm23458-201ENSMUST00000083257 169 ntBASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Mir194-2-201ENSMUST00000083648 86 ntBASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 AC149588.2-201ENSMUST00000228182 1859 ntBASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chrna5Q2MKA5 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chrna5Q2MKA5 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chrna5Q2MKA5 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chrna5Q2MKA5 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.81□□□□□ -0.36
Chrna5Q2MKA5 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chrna5Q2MKA5 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Chrna5Q2MKA5 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chrna5Q2MKA5 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.81□□□□□ -0.36
Chrna5Q2MKA5 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Chrna5Q2MKA5 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chrna5Q2MKA5 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chrna5Q2MKA5 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chrna5Q2MKA5 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chrna5Q2MKA5 Gm16518-201ENSMUST00000117960 508 ntBASIC12.81□□□□□ -0.36
Chrna5Q2MKA5 Gm8482-201ENSMUST00000117972 471 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms