Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
GabpaQ00422 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
GabpaQ00422 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.27□□□□□ -0.44
GabpaQ00422 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC12.27□□□□□ -0.44
GabpaQ00422 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
GabpaQ00422 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
GabpaQ00422 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
GabpaQ00422 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.27□□□□□ -0.45
GabpaQ00422 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
GabpaQ00422 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
GabpaQ00422 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GabpaQ00422 Gm23595-201ENSMUST00000104306 130 ntBASIC12.27□□□□□ -0.45
GabpaQ00422 Gm11544-201ENSMUST00000120215 382 ntBASIC12.27□□□□□ -0.45
GabpaQ00422 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
GabpaQ00422 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
GabpaQ00422 Gm13857-201ENSMUST00000139645 173 ntBASIC12.27□□□□□ -0.45
GabpaQ00422 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
GabpaQ00422 Gm6291-201ENSMUST00000179994 309 ntBASIC12.27□□□□□ -0.45
GabpaQ00422 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC12.27□□□□□ -0.45
GabpaQ00422 Gm8234-201ENSMUST00000198523 1107 ntBASIC12.27□□□□□ -0.45
GabpaQ00422 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC12.27□□□□□ -0.45
GabpaQ00422 Gm6794-201ENSMUST00000203829 457 ntBASIC12.27□□□□□ -0.45
GabpaQ00422 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GabpaQ00422 AC154585.1-201ENSMUST00000218917 997 ntBASIC12.27□□□□□ -0.45
GabpaQ00422 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
GabpaQ00422 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
GabpaQ00422 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
GabpaQ00422 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GabpaQ00422 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GabpaQ00422 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
GabpaQ00422 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
GabpaQ00422 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
GabpaQ00422 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
GabpaQ00422 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
GabpaQ00422 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
GabpaQ00422 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
GabpaQ00422 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
GabpaQ00422 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
GabpaQ00422 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC12.27□□□□□ -0.45
GabpaQ00422 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GabpaQ00422 Gm5697-201ENSMUST00000122295 2482 ntBASIC12.27□□□□□ -0.45
GabpaQ00422 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
GabpaQ00422 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GabpaQ00422 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
GabpaQ00422 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GabpaQ00422 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GabpaQ00422 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GabpaQ00422 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
GabpaQ00422 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
GabpaQ00422 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GabpaQ00422 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.26□□□□□ -0.45
GabpaQ00422 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GabpaQ00422 Gm24933-201ENSMUST00000103762 110 ntBASIC12.26□□□□□ -0.45
GabpaQ00422 Gm23252-201ENSMUST00000103776 110 ntBASIC12.26□□□□□ -0.45
GabpaQ00422 Gm22495-201ENSMUST00000104492 126 ntBASIC12.26□□□□□ -0.45
GabpaQ00422 Mir291b-201ENSMUST00000104838 79 ntBASIC12.26□□□□□ -0.45
GabpaQ00422 Gm6425-201ENSMUST00000136332 790 ntBASIC12.26□□□□□ -0.45
GabpaQ00422 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
GabpaQ00422 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC12.26□□□□□ -0.45
GabpaQ00422 Gm26443-201ENSMUST00000179610 110 ntBASIC12.26□□□□□ -0.45
GabpaQ00422 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
GabpaQ00422 Gm29543-201ENSMUST00000188138 967 ntBASIC12.26□□□□□ -0.45
GabpaQ00422 Gm5865-201ENSMUST00000198713 637 ntBASIC12.26□□□□□ -0.45
GabpaQ00422 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GabpaQ00422 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC12.26□□□□□ -0.45
GabpaQ00422 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC12.26□□□□□ -0.45
GabpaQ00422 Gm6564-201ENSMUST00000075377 619 ntBASIC12.26□□□□□ -0.45
GabpaQ00422 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC12.26□□□□□ -0.45
GabpaQ00422 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GabpaQ00422 Gm42521-201ENSMUST00000199190 2040 ntBASIC12.26□□□□□ -0.45
GabpaQ00422 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
GabpaQ00422 Gm12716-201ENSMUST00000120606 1354 ntBASIC12.26□□□□□ -0.45
GabpaQ00422 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
GabpaQ00422 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
GabpaQ00422 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.26□□□□□ -0.45
GabpaQ00422 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GabpaQ00422 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GabpaQ00422 Gm42427-201ENSMUST00000200473 5292 ntBASIC12.26□□□□□ -0.45
GabpaQ00422 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GabpaQ00422 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
GabpaQ00422 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GabpaQ00422 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GabpaQ00422 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GabpaQ00422 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
GabpaQ00422 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
GabpaQ00422 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GabpaQ00422 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GabpaQ00422 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GabpaQ00422 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
GabpaQ00422 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
GabpaQ00422 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
GabpaQ00422 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GabpaQ00422 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.25□□□□□ -0.45
GabpaQ00422 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.25□□□□□ -0.45
GabpaQ00422 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
GabpaQ00422 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
GabpaQ00422 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
GabpaQ00422 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.25□□□□□ -0.45
GabpaQ00422 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
GabpaQ00422 Gm16518-201ENSMUST00000117960 508 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms