Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
CiitaP79621 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
CiitaP79621 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.74□□□□□ -0.53
CiitaP79621 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.74□□□□□ -0.53
CiitaP79621 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
CiitaP79621 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 Gm42521-201ENSMUST00000199190 2040 ntBASIC11.74□□□□□ -0.53
CiitaP79621 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
CiitaP79621 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CiitaP79621 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CiitaP79621 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CiitaP79621 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
CiitaP79621 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
CiitaP79621 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CiitaP79621 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC11.73□□□□□ -0.53
CiitaP79621 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CiitaP79621 Gm11919-201ENSMUST00000117609 721 ntBASIC11.73□□□□□ -0.53
CiitaP79621 Gm12950-201ENSMUST00000121683 417 ntBASIC11.73□□□□□ -0.53
CiitaP79621 Gm25288-201ENSMUST00000122800 265 ntBASIC11.73□□□□□ -0.53
CiitaP79621 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CiitaP79621 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CiitaP79621 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CiitaP79621 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CiitaP79621 Gm5801-201ENSMUST00000182247 780 ntBASIC11.73□□□□□ -0.53
CiitaP79621 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.73□□□□□ -0.53
CiitaP79621 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CiitaP79621 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CiitaP79621 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC11.73□□□□□ -0.53
CiitaP79621 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.73□□□□□ -0.53
CiitaP79621 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CiitaP79621 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC11.73□□□□□ -0.53
CiitaP79621 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC11.73□□□□□ -0.53
CiitaP79621 AC022682.1-201ENSMUST00000224624 2023 ntBASIC11.73□□□□□ -0.53
CiitaP79621 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC11.73□□□□□ -0.53
CiitaP79621 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.73□□□□□ -0.53
CiitaP79621 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CiitaP79621 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CiitaP79621 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CiitaP79621 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CiitaP79621 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CiitaP79621 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CiitaP79621 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CiitaP79621 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
CiitaP79621 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
CiitaP79621 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CiitaP79621 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CiitaP79621 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
CiitaP79621 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CiitaP79621 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CiitaP79621 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
CiitaP79621 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
CiitaP79621 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CiitaP79621 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CiitaP79621 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CiitaP79621 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
CiitaP79621 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CiitaP79621 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.72□□□□□ -0.53
CiitaP79621 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.72□□□□□ -0.53
CiitaP79621 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
CiitaP79621 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 AC151836.1-201ENSMUST00000228730 1637 ntBASIC11.72□□□□□ -0.53
CiitaP79621 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CiitaP79621 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Gm23745-201ENSMUST00000104230 125 ntBASIC11.72□□□□□ -0.53
CiitaP79621 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CiitaP79621 Gm8659-201ENSMUST00000120024 1084 ntBASIC11.72□□□□□ -0.53
CiitaP79621 Gm6425-201ENSMUST00000136332 790 ntBASIC11.72□□□□□ -0.53
CiitaP79621 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CiitaP79621 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC11.72□□□□□ -0.53
CiitaP79621 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms